RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SHMT2P34897 504 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ZFP36L2P47974 494 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 KCNK10P57789 538 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 SEMA3AQ14563 771 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 MFSD10Q14728 455 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 POLD3Q15054 466 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 SIRPB2Q5JXA9 342 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 CCNYL2Q5T2Q4 361 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 C16orf87Q6PH81 154 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 SCIMPQ6UWF3 145 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 PTRH1Q86Y79 214 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 KIAA2013Q8IYS2 634 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 CENPSQ8N2Z9 138 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TERB1Q8NA31 727 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 MUS81Q96NY9 551 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ASB2Q96Q27 587 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ATOH8Q96SQ7 321 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 FANCEQ9HB96 536 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM165Q9HC07 324 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 INTS7Q9NVH2 962 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 COQ6Q9Y2Z9 468 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 CORINQ9Y5Q5 1042 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 FUOMA2VDF0 154 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 H0Y858 1186 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 GJB3O75712 270 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 GOT2P00505 430 aaKnown RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 C1RP00736 705 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 FUCA1P04066 466 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 HRH2P25021 359 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 MAP4P27816 1152 aaKnown RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 EEF1DP29692 281 aaKnown RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 UFM1P61960 85 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 ADAM17P78536 824 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CLCQ05315 142 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 PRAMEF19Q5SWL8 479 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 OR13F1Q8NGS4 319 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 BIRC7Q96CA5 298 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 HMCESQ96FZ2 354 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 RNF145Q96MT1 663 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CHID1Q9BWS9 393 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 C8orf4Q9NR00 106 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 TLR9Q9NR96 1032 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 UXTQ9UBK9 157 aaPredicted RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 SUPT3HB4E1H0 165 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 LDB2O43679 373 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CRCPO75575 148 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CPNE6O95741 557 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 ALBP02768 609 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CYBBP04839 570 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 THP07101 528 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 PRSS56P0CW18 603 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CCNA2P20248 432 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 PRDX3P30048 256 aaKnown RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 MAGEA10P43363 369 aaPredicted RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 SCNN1GP51170 649 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 CRYBB1P53674 252 aaPredicted RBP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 OR4D2P58180 307 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 RELAQ04206 551 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 GRSF1Q12849 480 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNIP1-204ENST00000638725 RCAN2Q14206 197 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 MOGQ16653 247 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 TIGD2Q4W5G0 525 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 COQ5Q5HYK3 327 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 SLC15A4Q8N697 577 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 ARMC7Q9H6L4 198 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM9Q9P0T7 183 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 IKZF3Q9UKT9 509 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 ARL5AQ9Y689 179 aa10.86□□□□□ -0.67
SNIP1-204ENST00000638725 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF12P17014 697 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 BRCC3P46736 316 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 RENBPP51606 427 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 GNA12Q03113 381 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 LCP2Q13094 533 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 PIK3R6Q5UE93 754 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 MARC1Q5VT66 337 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF773Q6PK81 442 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ITIH5Q86UX2 942 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 LRRTM3Q86VH5 581 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 BPIFB6Q8NFQ5 453 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 OR13C4Q8NGS5 318 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 HASPINQ8TF76 798 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 SNX19Q92543 992 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 SGCDQ92629 289 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 MUC13Q9H3R2 512 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 SMOC2Q9H3U7 446 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 ABHD16BQ9H3Z7 469 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 AGO3Q9H9G7 860 aaKnown RBP10.85□□□□□ -0.67
SNIP1-204ENST00000638725 NANOGQ9H9S0 305 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 PFDN4Q9NQP4 134 aa10.85□□□□□ -0.67
SNIP1-204ENST00000638725 AIG1Q9NVV5 245 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms