RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 FAM160B2Q86V87 743 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 BRSK2Q8IWQ3 736 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 RIMKLAQ8IXN7 391 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 EMC1Q8N766 993 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF555Q8NEP9 628 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 PCDH19Q8TAB3 1148 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 FAM84AQ96KN4 292 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 CITED4Q96RK1 184 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ADPGKQ9BRR6 497 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 TEX13BQ9BXU2 312 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 DPEP3Q9H4B8 488 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF556Q9HAH1 456 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 B3GNT2Q9NY97 397 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 EIF3KQ9UBQ5 218 aaKnown RBP11.96□□□□□ -0.49
CAPN3-221ENST00000638141 CFL2Q9Y281 166 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 RWDD3Q9Y3V2 267 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 RIPK3Q9Y572 518 aa11.96□□□□□ -0.49
CAPN3-221ENST00000638141 COL2A1P02458 1487 aaPredicted RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 LOC110117498-PIK3R3F6TDL0 507 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 DFNA5O60443 496 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 NOS1APO75052 506 aaPredicted RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TULP3O75386 442 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 MED26O95402 600 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 PRKACAP17612 351 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 HDCP19113 662 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 MGAT1P26572 445 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TALDO1P37837 337 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 DSTNP60981 165 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 ISL1P61371 349 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 NCS1P62166 190 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TRAF3Q13114 568 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 SEMA3BQ13214 749 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 CTU2Q2VPK5 515 aaKnown RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 HEATR6Q6AI08 1181 aaKnown RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 RETREG3Q86VR2 466 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 DEPDC4Q8N2C3 294 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM199Q8N511 208 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TMCO6Q96DC7 493 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 ZHX1-C8orf76Q96EF9 292 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 COA1Q9GZY4 146 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 DHX35Q9H5Z1 703 aaKnown RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TASP1Q9H6P5 420 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 CMTM6Q9NX76 183 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 CCDC59Q9P031 241 aaKnown RBP11.96□□□□□ -0.5
CAPN3-221ENST00000638141 MAP10Q9P2G4 905 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 GTF2IRD1Q9UHL9 959 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 PCDHA9Q9Y5H5 950 aa11.96□□□□□ -0.5
CAPN3-221ENST00000638141 INPP4BO15327 924 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 ERVK-10P10266 1014 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 JUNDP17535 347 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 SLC6A2P23975 617 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 CXCR4P61073 352 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 PRKCEQ02156 737 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 IMPG1Q17R60 797 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 PITRM1Q5JRX3 1037 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 LAYNQ6UX15 382 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 HDDC2Q7Z4H3 204 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 FUNDC1Q8IVP5 155 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TCAIMQ8N3R3 496 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 PARP16Q8N5Y8 322 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 OR5B17Q8NGF7 314 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 OR10Z1Q8NGY1 313 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TSPEARQ8WU66 669 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 MRIQ9BWK5 157 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TOR3AQ9H497 397 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 DUSP21Q9H596 190 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 POLLQ9UGP5 575 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 RAPGEFL1Q9UHV5 662 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 CYTH4Q9UIA0 394 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TLK1Q9UKI8 766 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 USP22Q9UPT9 525 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 TRAPPC4Q9Y296 219 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 PCDHGB6Q9Y5F9 930 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 AUP1Q9Y679 476 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 WDR81Q562E7 1941 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
CAPN3-221ENST00000638141 LEUTXA8MZ59 168 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 NFKBIEO00221 500 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 NDUFA2O43678 99 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 DLX3O60479 287 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 UGT2B17O75795 530 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SLC4A1P02730 911 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 CHRM3P20309 590 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 CYP2C18P33260 490 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 ACOT2P49753 483 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 UGT2B15P54855 530 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms