RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 STK10O94804 968 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 TJP3O95049 919 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 FGF1P05230 155 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 PNLIPP16233 465 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 RBL1P28749 1068 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 MAZP56270 477 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
PNKP-228ENST00000637325 NOMO1Q15155 1222 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 TBC1D25Q3MII6 688 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 PYCR3Q53H96 274 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ZNF569Q5MCW4 686 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ITPRIPL1Q6GPH6 555 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 FOXR1Q6PIV2 292 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 TMEM139Q8IV31 216 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 SFTPA2Q8IWL1 248 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 SLC25A41Q8N5S1 370 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 UBL4BQ8N7F7 174 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ZNF578Q96N58 590 aaPredicted RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 FCRL5Q96RD9 977 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 WDR24Q96S15 920 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 ZSCAN5AQ9BUG6 496 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 VPS18Q9P253 973 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 APPL1Q9UKG1 709 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 CNOT6Q9ULM6 557 aaKnown RBP13.7□□□□□ -0.22
PNKP-228ENST00000637325 SATB2Q9UPW6 733 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 PLEKHM1Q9Y4G2 1056 aa13.7□□□□□ -0.22
PNKP-228ENST00000637325 PTPRQQ9UMZ3 2332 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 SLC25A14O95258 325 aaPredicted RBP13.69□□□□□ -0.22
PNKP-228ENST00000637325 ECEL1O95672 775 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 EPOP01588 193 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 PTPN7P35236 360 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 EIF3EP60228 445 aaKnown RBP13.69□□□□□ -0.22
PNKP-228ENST00000637325 MPP3Q13368 585 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 LRP8Q14114 963 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 KDELC1Q6UW63 502 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 ARL14Q8N4G2 192 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 TRAM1L1Q8N609 369 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 LRRC57Q8N9N7 239 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 IPMKQ8NFU5 416 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
PNKP-228ENST00000637325 EID2BQ96D98 161 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 FSD1LQ9BXM9 530 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 BPIFA1Q9NP55 256 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 TRIM10Q9UDY6 481 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
PNKP-228ENST00000637325 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 ZFYVE26Q68DK2 2539 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 LAMA5O15230 3695 aa13.69□□□□□ -0.22
PNKP-228ENST00000637325 AHCTF1Q8WYP5 2266 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 A0A087WV48 116 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 LOC285095A0A1B0GVY8 99 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 A0A1W2PQM1 296 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 GOLGA6L9A6NEM1 432 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 D6RAR5 112 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 ANXA9O76027 345 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 RBP3P10745 1247 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 PYGMP11217 842 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 ALDH4A1P30038 563 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 EIF2S3P41091 472 aaKnown RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 ABCG1P45844 678 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 PPM1FP49593 454 aaPredicted RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 GEMP55040 296 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 INHBCP55103 352 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 GSDMDP57764 484 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 DCDC1P59894 354 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 AMZ1Q400G9 498 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 SIRPB2Q5JXA9 342 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 PDPK2PQ6A1A2 396 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 AADACL2Q6P093 401 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 CHST15Q7LFX5 561 aaPredicted RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 SNIP1Q8TAD8 396 aaKnown RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 BLOC1S5Q8TDH9 187 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 ALG3Q92685 438 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 OXNAD1Q96HP4 312 aaPredicted RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 MRGPRX2Q96LB1 330 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 TMEM74Q96NL1 305 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 FAM118BQ9BPY3 351 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 FOXP3Q9BZS1 431 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 TRABDQ9H4I3 376 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 ARFGAP3Q9NP61 516 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 THSD1Q9NS62 852 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 HACD3Q9P035 362 aa13.68□□□□□ -0.22
PNKP-228ENST00000637325 ATXN7L1Q9ULK2 861 aaPredicted RBP13.68□□□□□ -0.22
PNKP-228ENST00000637325 PRKAB1Q9Y478 270 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms