RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 VPS4BO75351 444 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 ARIH2O95376 493 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 NTRK1P04629 796 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 CDH1P12830 882 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 HGFP14210 728 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 YBX1P67809 324 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 SH3BP2P78314 561 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 DENND5AQ6IQ26 1287 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 STK32CQ86UX6 486 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 OR7A2PQ8NGA2 310 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 ERLEC1Q96DZ1 483 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 NSMCE2Q96MF7 247 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 PPP1R2P1Q96PQ5 205 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 FCRL5Q96RD9 977 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 TRIM8Q9BZR9 551 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 ENTPD7Q9NQZ7 604 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 KLHL3Q9UH77 587 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 DSEQ9UL01 958 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 HTTP42858 3142 aa15.5■□□□□ 0.07
CACNA1A-235ENST00000637004 FAM47E-STBD1D6RA91 191 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 M0R3G1 203 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 AURKAO14965 403 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 SLC22A1O15245 554 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 MSI1O43347 362 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 TSPAN1O60635 241 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 AOC2O75106 756 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 APLP1P51693 650 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 DNASE1L3Q13609 305 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 CTF1Q16619 201 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 DGUOKQ16854 277 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 PGS1Q32NB8 556 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 PHYKPLQ8IUZ5 450 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ZNF555Q8NEP9 628 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ZFP90Q8TF47 636 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 DPF3Q92784 378 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 RPL10LQ96L21 214 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 MID1IP1Q9NPA3 183 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 SLC52A3Q9NQ40 469 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 FBXO8Q9NRD0 319 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 RBMX2Q9Y388 322 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 MT-CYBP00156 380 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 IL7RP16871 459 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 BDNFP23560 247 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 CA8P35219 290 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 GJA5P36382 358 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 GEMP55040 296 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 CDH13P55290 713 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 IFITM3Q01628 133 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ILF2Q12905 390 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 GRIK2Q13002 908 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 FUT11Q495W5 492 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ZNF484Q5JVG2 852 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 HECTD2Q5U5R9 776 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 RAB44Q7Z6P3 723 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ZDHHC13Q8IUH4 622 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 IQCF2Q8IXL9 164 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 RIMKLAQ8IXN7 391 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 SCML4Q8N228 414 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 EHD1Q9H4M9 534 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 NTN4Q9HB63 628 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 DNMT3BQ9UBC3 853 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 IFT52Q9Y366 437 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 V9GYQ6 96 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 TNPO2O14787 897 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 LSM1O15116 133 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 CDK14O94921 469 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 PRSS23O95084 383 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 NR4A1P22736 598 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 SERPINB1P30740 379 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 TPTEP56180 551 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ECT2LQ008S8 904 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 SELENBP1Q13228 472 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 IMPG1Q17R60 797 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 CATSPER4Q7RTX7 472 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ANKRD49Q8WVL7 239 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 KCTD13Q8WZ19 329 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 TMBIM1Q969X1 311 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 TOR3AQ9H497 397 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 GIMAP2Q9UG22 337 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 MAGEL2Q9UJ55 1249 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 LEF1Q9UJU2 399 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 PCDHGA8Q9Y5G5 932 aa15.49■□□□□ 0.07
CACNA1A-235ENST00000637004 NDUFS2O75306 463 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 TKTP29401 623 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 RCAN2Q14206 197 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 FXNQ16595 210 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 CLPPQ16740 277 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 INAVAQ3KP66 663 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 DCAF4L1Q3SXM0 396 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 FBXO47Q5MNV8 452 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 C9orf57Q5W0N0 161 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 ISCA2Q86U28 154 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 MFSD4AQ8N468 514 aa15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 CHDHQ8NE62 594 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-235ENST00000637004 NODALQ96S42 347 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms