RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 ITPKAP23677 461 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 OR3A3P47888 321 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 OR3A2P47893 321 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC9B1Q4ZJI4 515 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 PCID2Q5JVF3 399 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC8B1Q6J4K2 584 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 GIT2Q14161 759 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 BEND7Q8N7W2 519 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 RBM18Q96H35 190 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 CCDC120Q96HB5 630 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ATPIF1Q9UII2 106 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 MFHAS1Q9Y4C4 1052 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 PRLRP16471 622 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF20P17024 532 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 RBL1P28749 1068 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF606Q8WXB4 792 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 EXOSC8Q96B26 276 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 PACSIN3Q9UKS6 424 aa17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF490Q9ULM2 529 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-225ENST00000636389 NPEPPSL1A6NEC2 478 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 SCAMP1O15126 338 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 TFEBP19484 476 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 ZFP69Q49AA0 526 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 USP49Q70CQ1 688 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 NXPE2Q96DL1 559 aa17.46■□□□□ 0.38
CACNA1A-225ENST00000636389 GNB5O14775 395 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MC4RP32245 332 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 SCNN1AP37088 669 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PTPRNQ16849 979 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 KLHL26Q53HC5 615 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MSANTD2Q6P1R3 559 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 POF1BQ8WVV4 589 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ERVK-18Q9QC07 812 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 CRB1P82279 1406 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PPP1R3GB7ZBB8 358 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 CFIP05156 583 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MCOLN2Q8IZK6 566 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MTMR8Q96EF0 704 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 FKBP7Q9Y680 259 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PHF19Q5T6S3 580 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 RBMX2Q9Y388 322 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ATG13O75143 517 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 HERVK_113P62684 666 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ECH1Q13011 328 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 UBE2J2Q8N2K1 259 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MEMO1Q9Y316 297 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ASTN2O75129 1339 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 MIPP30301 263 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 SLC7A1P30825 629 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PRAMEF17Q5VTA0 474 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 TMEM86AQ8N2M4 240 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PCDH19Q8TAB3 1148 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 RSL24D1Q9UHA3 163 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 RLN2P04090 185 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 LINGO3P0C6S8 592 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 UQCRC1P31930 480 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 CDK16Q00536 496 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 OR10H4Q8NGA5 316 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 RIPOR3Q96MK2 946 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 SEMA3CQ99985 751 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 RMI1Q9H9A7 625 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 DGKBQ9Y6T7 804 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 OR2AT4A6NND4 320 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 ZNF726A6NNF4 738 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PRKCDQ05655 676 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 PPATQ06203 517 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 OR8H1Q8NGG4 311 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 HEPHQ9BQS7 1158 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 TOR3AQ9H497 397 aa17.45■□□□□ 0.38
CACNA1A-225ENST00000636389 AP5Z1O43299 807 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 AVPR1BP47901 424 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 CDH4P55283 916 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 E2F2Q14209 437 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 MFSD3Q96ES6 412 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 C11orf16Q9NQ32 467 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 PGM5Q15124 567 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 TNFAIP8L3Q5GJ75 292 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 GPR65Q8IYL9 337 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 OR6K6Q8NGW6 343 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 OR52J3Q8NH60 311 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 FBXO9Q9UK97 447 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 IQCF5A8MTL0 148 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 GNSP15586 552 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 GALNT13Q8IUC8 556 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 PNLDC1Q8NA58 520 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 ANKZF1Q9H8Y5 726 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 UBXN7O94888 489 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 ADCYAP1R1P41586 468 aa17.44■□□□□ 0.38
CACNA1A-225ENST00000636389 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms