RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SPATA31A1Q5TZJ5 1347 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CITO14578 2027 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TULP3O75386 442 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 IDO1P14902 403 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PVALBP20472 110 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FGFR3P22607 806 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NR4A1P22736 598 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 S100A2P29034 98 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OR3A3P47888 321 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OR3A2P47893 321 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ARCN1P48444 511 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OCLNQ16625 522 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 HFE2Q6ZVN8 426 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 C12orf56Q8IXR9 622 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM145Q8NBT3 493 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 BRSK1Q8TDC3 778 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 THRSPQ92748 146 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DCUN1D5Q9BTE7 237 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FUT8Q9BYC5 575 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TDP1Q9NUW8 608 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GMEB2Q9UKD1 530 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TRIM64CA6NLI5 447 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TPP1O14773 563 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NOS1APO75052 506 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CTPS1P17812 591 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ADCYAP1R1P41586 468 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TMBIM6P55061 237 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DNM1P34Q6PK57 102 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ABHD13Q7L211 337 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OR4L1Q8NH43 312 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF606Q8WXB4 792 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PPP1R14BQ96C90 147 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 LINGO1Q96FE5 620 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DEFB118Q96PH6 123 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 LGR4Q9BXB1 951 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 BRF2Q9HAW0 419 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ADAM28Q9UKQ2 775 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PCDHGB7Q9Y5F8 929 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF536O15090 1300 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 A0A075B6Q4 140 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ANXA2P2A6NMY6 339 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CHADO15335 359 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DCXO43602 365 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 LRATO95237 230 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CSTBP04080 98 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ANXA2P07355 339 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CSTF2P33240 577 aaKnown RBP eCLIP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SLC6A9P48067 706 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DHPSP49366 369 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SMAD3P84022 425 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ECH1Q13011 328 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PUM1Q14671 1186 aaKnown RBP eCLIP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CARTPTQ16568 116 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 WSCD1Q658N2 575 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NIPA1Q7RTP0 329 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 UNC93AQ86WB7 457 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZZZ3Q8IYH5 903 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CFAP206Q8IYR0 622 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 C7orf61Q8IZ16 206 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 UBE2J2Q8N2K1 259 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF611Q8N823 705 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 LCN9Q8WX39 176 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NINJ1Q92982 152 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OXNAD1Q96HP4 312 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ACAT2Q9BWD1 397 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TRMT13Q9NUP7 481 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SIRPGQ9P1W8 387 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 POU2F3Q9UKI9 436 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SLC27A5Q9Y2P5 690 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PCDHGB2Q9Y5G2 931 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CLCA3PQ9Y6N3 262 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CEP152O94986 1710 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ANKRD12Q6UB98 2062 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NEMP2A6NFY4 417 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FPGTO14772 594 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TNFP01375 233 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 AHCYP23526 432 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PGDP52209 483 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ATP6V0D1P61421 351 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CCINQ13939 588 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TARBP2Q15633 366 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 RGS21Q2M5E4 152 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 AMZ1Q400G9 498 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZC3H12AQ5D1E8 599 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ALG10BQ5I7T1 473 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CASKIN2Q8WXE0 1202 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 C11orf24Q96F05 449 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CDCA5Q96FF9 252 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MYO19Q96H55 970 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 RTKNQ9BST9 563 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GLIS2Q9BZE0 524 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NELFAQ9H3P2 528 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SRMSQ9H3Y6 488 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CCNB1IP1Q9NPC3 277 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 OR6C75A6NL08 312 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 H3BQF6 201 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PLD2O14939 933 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms