RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GNL1P36915 607 aaPredicted RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 TMPOP42166 694 aaKnown RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.713e-6■■■□□ 15.7
GPCPD1-207ENST00000633552 NRIP1P48552 1158 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GPR143P51810 404 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 PDE1BQ01064 536 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 LTBQ06643 244 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SREBF2Q12772 1141 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 EPS8Q12929 822 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 STK4Q13043 487 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GAGE1Q13065 139 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GAGE4Q13068 117 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 TRAF3Q13114 568 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 TNFAIP1Q13829 316 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 KRT33BQ14525 404 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 FAM69BQ5VUD6 431 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 FRG2Q64ET8 278 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 TMEM198Q66K66 360 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 ZNF280DQ6N043 979 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 CFAP77Q6ZQR2 320 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 ARID3BQ8IVW6 561 aaPredicted RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 FOXRED2Q8IWF2 684 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SCYL3Q8IZE3 742 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 CCDC89Q8N998 374 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 POC5Q8NA72 575 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 APPL2Q8NEU8 664 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 GSDMBQ8TAX9 411 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 DNAAF4Q8WXU2 420 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 CCDC34Q96HJ3 373 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 RSRC1Q96IZ7 334 aaKnown RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 ADGRG7Q96K78 797 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SEMA3CQ99985 751 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 EPB41L5Q9HCM4 733 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 MRPL15Q9P015 296 aaKnown RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SUCLA2Q9P2R7 463 aaPredicted RBP4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SIX4Q9UIU6 781 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 SNX8Q9Y5X2 465 aa4.39□□□□□ -1.71
GPCPD1-207ENST00000633552 IGLV5-37A0A075B6J1 123 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 CPED1A4D0V7 1026 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 DAB1O75553 588 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 BEST1O76090 585 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 CLDN14O95500 239 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 AFPP02771 609 aaKnown RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 SRCP12931 536 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 KCNC3Q14003 757 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 OASLQ15646 514 aaKnown RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 IZUMO4Q1ZYL8 232 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 EPHX4Q8IUS5 362 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 SPATA2LQ8IUW3 424 aaPredicted RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 BEST3Q8N1M1 668 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 WFIKKN2Q8TEU8 576 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 PPP4R1Q8TF05 950 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 RTP4Q96DX8 246 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 TMEM19Q96HH6 336 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 EGLN2Q96KS0 407 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 WACQ9BTA9 647 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 ARHGEF38Q9NXL2 777 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 ZNF224Q9NZL3 707 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 CPSF2Q9P2I0 782 aaKnown RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 AMDHD2Q9Y303 409 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 PTRH2Q9Y3E5 179 aaKnown RBP4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 EVPLQ92817 2033 aa4.38□□□□□ -1.71
GPCPD1-207ENST00000633552 CDRT15L2A8MXV6 281 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 CLGNO14967 610 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 RFPL2O75678 378 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 MMP9P14780 707 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 ACSL1P33121 698 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 NNMTP40261 264 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 LMAN1P49257 510 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 AMPHP49418 695 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 RRP1P56182 461 aaKnown RBP4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 TUBA1BP68363 451 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 TMF1P82094 1093 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 PPP2R2BQ00005 443 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 ECT2LQ008S8 904 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 NUCB1Q02818 461 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 SNTA1Q13424 505 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 SF3B4Q15427 424 aaKnown RBP eCLIP4.37□□□□□ -1.716e-8■■■■■ 31.4
GPCPD1-207ENST00000633552 NTRK2Q16620 822 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 CCDC96Q2M329 555 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 LRCH2Q5VUJ6 765 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 PMS2CLQ68D20 193 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 TMCO3Q6UWJ1 677 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 MCUQ8NE86 351 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 DUSP19Q8WTR2 217 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 TANKQ92844 425 aa4.37□□□□□ -1.71
GPCPD1-207ENST00000633552 SCMH1Q96GD3 660 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms