RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 PRELID2Q8N945 189 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 KYQ8NBH2 561 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 GPBAR1Q8TDU6 330 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 APOL2Q9BQE5 337 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
DDX41-219ENST00000629036 FAM83DQ9H4H8 585 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 SUFUQ9UMX1 484 aa11.03□□□□□ -0.64
DDX41-219ENST00000629036 INPP4BO15327 924 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 NOBOXO60393 691 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 ZNF189O75820 626 aaPredicted RBP11.02□□□□□ -0.65
DDX41-219ENST00000629036 FGGP02679 453 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 ETS1P14921 441 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 KELP23276 732 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PSMA3P25788 255 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 GPR1P46091 355 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 BLKP51451 505 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
DDX41-219ENST00000629036 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 SPARCL1Q14515 664 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PTPRCAPQ14761 206 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TCEA2Q15560 299 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 CCNG2Q16589 344 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PARP6Q2NL67 630 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 P3H1Q32P28 736 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PYCR3Q53H96 274 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 GUSBP11Q6P575 273 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 OGFOD3Q6PK18 319 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 MARCH9Q86YJ5 346 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TRAM1L1Q8N609 369 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 GPR156Q8NFN8 814 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 DTX3LQ8TDB6 740 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 HIC2Q96JB3 615 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PLEKHG4BQ96PX9 1271 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 DUSP23Q9BVJ7 150 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 SLC13A1Q9BZW2 595 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 CCDC86Q9H6F5 360 aaKnown RBP11.02□□□□□ -0.65
DDX41-219ENST00000629036 CYP4F12Q9HCS2 524 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 IL26Q9NPH9 171 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PKD2L2Q9NZM6 624 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TTC7AQ9ULT0 858 aaPredicted RBP11.02□□□□□ -0.65
DDX41-219ENST00000629036 APOBEC2Q9Y235 224 aaKnown RBP11.02□□□□□ -0.65
DDX41-219ENST00000629036 ZKSCAN5Q9Y2L8 839 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 RAXQ9Y2V3 346 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 TMEM98Q9Y2Y6 226 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 JRKLQ9Y4A0 524 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 PLEKHM1Q9Y4G2 1056 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 KCTD3Q9Y597 815 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 ARL5AQ9Y689 179 aa11.02□□□□□ -0.65
DDX41-219ENST00000629036 A6NCN8 305 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 NEMP2A6NFY4 417 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 LDB2O43679 373 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 BUD23O43709 281 aaKnown RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 RFPL3O75679 317 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SUN1O94901 812 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 TRIM16O95361 564 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 AP2A1O95782 977 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SLC4A1P02730 911 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 PYGLP06737 847 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ADCY8P40145 1251 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 XIAPP98170 497 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 INSM1Q01101 510 aaPredicted RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 C19orf57Q0VDD7 668 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ILKQ13418 452 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SNX1Q13596 522 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 CYP1B1Q16678 543 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ATP13A5Q4VNC0 1218 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 PERM1Q5SV97 790 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ZNF648Q5T619 568 aaPredicted RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 CDCP2Q5VXM1 449 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ALS2CLQ60I27 953 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 PDPK2PQ6A1A2 396 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 TTC27Q6P3X3 843 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 DHRS13Q6UX07 377 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 XKR5Q6UX68 686 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SDR16C5Q8N3Y7 309 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ATL2Q8NHH9 583 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 CCHCR1Q8TD31 782 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 CCDC97Q96F63 343 aaPredicted RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 MS4A14Q96JA4 679 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 VPS35Q96QK1 796 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SRPK1Q96SB4 655 aaKnown RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 TBL1YQ9BQ87 522 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 ZSCAN5AQ9BUG6 496 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 FSD1LQ9BXM9 530 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 GPR63Q9BZJ6 419 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 CDH19Q9H159 772 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 BPIFA1Q9NP55 256 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
DDX41-219ENST00000629036 TRNAU1APQ9NX07 287 aaKnown RBP11.01□□□□□ -0.65
DDX41-219ENST00000629036 TRMT1Q9NXH9 659 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms