RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 Q6ZVL8 140 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 FJX1Q86VR8 437 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 TSEN2Q8NCE0 465 aaKnown RBP13.73□□□□□ -0.21
SNX1-214ENST00000625244 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.73□□□□□ -0.21
SNX1-214ENST00000625244 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 LATS2Q9NRM7 1088 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 C5AR2Q9P296 337 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 CPNE7Q9UBL6 633 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 SLC30A1Q9Y6M5 507 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 ZGRF1Q86YA3 2104 aa13.73□□□□□ -0.21
SNX1-214ENST00000625244 FAM237AA0A1B0GTK4 181 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 LILRA5A6NI73 299 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 GOLGA8SH3BPF8 625 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 SNX2O60749 519 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
SNX1-214ENST00000625244 KRT9P35527 623 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 CSNK1DP48730 415 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 UBE2HP62256 183 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 CDO1Q16878 200 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
SNX1-214ENST00000625244 COBLL1Q53SF7 1204 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 VWA5B1Q5TIE3 1220 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 KCNMB4Q86W47 210 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 ZNF295-AS1Q8N0V1 137 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 KLHL6Q8WZ60 621 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 KCNK6Q9Y257 313 aa13.72□□□□□ -0.21
SNX1-214ENST00000625244 KLF2Q9Y5W3 355 aaPredicted RBP13.72□□□□□ -0.21
SNX1-214ENST00000625244 PRICKLE3O43900 615 aaPredicted RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 UBXN7O94888 489 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 ZNF202O95125 648 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 TNFAIP3P21580 790 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 LHCGRP22888 699 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 GPR1P46091 355 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 YBEYP58557 167 aaPredicted RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 UBE2IP63279 158 aaKnown RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 PARP15Q460N3 678 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 ANO6Q4KMQ2 910 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 ZNF658Q5TYW1 1059 aaPredicted RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 MYO7BQ6PIF6 2116 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 CLEC17AQ6ZS10 378 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 MED25Q71SY5 747 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 CHST15Q7LFX5 561 aaPredicted RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 PRSS42Q7Z5A4 293 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 CCDC185Q8N715 623 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 EMC1Q8N766 993 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
SNX1-214ENST00000625244 SHC3Q92529 594 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 AGPAT4Q9NRZ5 378 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 ZNHIT2Q9UHR6 403 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 RARRES3Q9UL19 164 aa13.71□□□□□ -0.21
SNX1-214ENST00000625244 ACANP16112 2415 aa13.71□□□□□ -0.22
SNX1-214ENST00000625244 VPS13CQ709C8 3753 aa13.71□□□□□ -0.22
SNX1-214ENST00000625244 WASH4PA8MWX3 477 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 F3P13726 295 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 COX6B1P14854 86 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 FOLR1P15328 257 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 BPIP17213 487 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 NELFEP18615 380 aaKnown RBP13.7□□□□□ -0.22
SNX1-214ENST00000625244 EPHB2P29323 1055 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 VIPR1P32241 457 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 CA5AP35218 305 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 VAV2P52735 878 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 HDAC4P56524 1084 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 DPTQ07507 201 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 KCNAB1Q14722 419 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 PTPRRQ15256 657 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 LLGL1Q15334 1064 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 KYNUQ16719 465 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 ADAMTSL4Q6UY14 1074 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 FAM92BQ6ZTR7 304 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 TRIM59Q8IWR1 403 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 PYROXD2Q8N2H3 581 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 ZBTB2Q8N680 514 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 ITLN2Q8WWU7 325 aaPredicted RBP13.7□□□□□ -0.22
SNX1-214ENST00000625244 MR1Q95460 341 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 CHST8Q9H2A9 424 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 GOLPH3LQ9H4A5 285 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 CD84Q9UIB8 345 aa13.7□□□□□ -0.22
SNX1-214ENST00000625244 KIR2DS5A0A0G2JLQ3 304 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 A0A0G2JNG1 304 aa13.69□□□□□ -0.22
SNX1-214ENST00000625244 A0A0U1RQS6 177 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms