RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NUSAP1Q9BXS6 441 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 FBXO44Q9H4M3 255 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 EIF3KQ9UBQ5 218 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 ATPIF1Q9UII2 106 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZNF232Q9UNY5 417 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 GRIP1Q9Y3R0 1128 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CARNS1A5YM72 827 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TNFRSF11BO00300 401 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ACOX3O15254 700 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CYP7B1O75881 506 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZNF806P0C7X5 589 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 UROSP10746 265 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ALDH3A2P51648 485 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TBX4P57082 545 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 PPM1JQ5JR12 505 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 RALGPS2Q86X27 583 aaPredicted RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 NAT8LQ8N9F0 302 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ATG4CQ96DT6 458 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 RDH12Q96NR8 316 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 FNDC11Q9BVV2 318 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TPK1Q9H3S4 243 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DSN1Q9H410 356 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZFP14Q9HCL3 533 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 A0A0X1KG70 313 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 FADS2P1A8MWK0 482 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 PLOD2O00469 737 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 KPNA3O00505 521 aaPredicted RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 SERPINB7O75635 380 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 PSKH1P11801 424 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TYMPP19971 482 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DNAJB1P25685 340 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 MOGSQ13724 837 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DLG2Q15700 870 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZNF404Q494X3 552 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DCAF12L1Q5VU92 463 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DDX53Q86TM3 631 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 COLGALT2Q8IYK4 626 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZUFSPQ96AP4 578 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 HTATIP2Q9BUP3 242 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CCSER2Q9H7U1 834 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 LMO7Q8WWI1 1683 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 SPTLC1O15269 473 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 RPLP2P05387 115 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 ALDH4A1P30038 563 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 SHMT1P34896 483 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 WSCD2Q2TBF2 565 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DEF8Q6ZN54 512 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 STRADAQ7RTN6 431 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 VGLL2Q8N8G2 317 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 STON2Q8WXE9 905 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 PPM1MQ96MI6 270 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 GFM1Q96RP9 751 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 HSD17B14Q9BPX1 270 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 KCNN2Q9H2S1 579 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 OR12D3Q9UGF7 316 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 H3BNH8 94 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 NFICP08651 508 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 GOT1P17174 413 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 KLRK1P26718 216 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CAP2P40123 477 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 HNMTP50135 292 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CLCN3P51790 818 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 RAB2AP61019 212 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 GLB1LQ6UWU2 654 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ELMOD2Q8IZ81 293 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 PLD5Q8N7P1 536 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 BBS4Q96RK4 519 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 DPP7Q9UHL4 492 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 NOCTQ9UK39 431 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 LYVE1Q9Y5Y7 322 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 A0A1W2PPW3 197 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TGFB3P10600 412 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ITGB6P18564 788 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 KLRC2P26717 231 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 YWHAQP27348 245 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 HOXD12P35452 270 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CLK2P49760 499 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 FAM156AQ8NDB6 213 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 ZBTB45Q96K62 511 aaPredicted RBP8.87□□□□□ -0.99
VCL-206ENST00000623461 KLK14Q9P0G3 267 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 CNTN6Q9UQ52 1028 aa8.87□□□□□ -0.99
VCL-206ENST00000623461 MYO9BQ13459 2157 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 H0YAE9 185 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 KPNA6O60684 536 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 PRAMEF1O95521 474 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 GSTT2BP0CG30 244 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 IFI30P13284 250 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 AZGP1P25311 298 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 HECTD2Q5U5R9 776 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 KLHL35Q6PF15 583 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 OR52K2Q8NGK3 314 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC2A14Q8TDB8 520 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 TMEM159Q96B96 161 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 TBC1D14Q9P2M4 693 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 NUP50Q9UKX7 468 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms