RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NDE1Q9NXR1 346 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 RNF112Q9ULX5 631 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 ERVW-1Q9UQF0 538 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 SLC27A6Q9Y2P4 619 aa16.25■□□□□ 0.19
LDB3-208ENST00000623007 AGAP14A8MT82 685 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ZBTB14O43829 449 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 MAGEC1O60732 1142 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 PRAMEF12O95522 483 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CA3P07451 260 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 KRT16P08779 473 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 SYN1P17600 705 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CHRM3P20309 590 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 HNRNPH1P31943 449 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 GMPRP36959 345 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CDKN3Q16667 212 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 TTLL9Q3SXZ7 439 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ZNF678Q5SXM1 525 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 C6orf163Q5TEZ5 329 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 TMEM207Q6UWW9 146 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 GDPD4Q6W3E5 623 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 MAELQ96JY0 434 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 PANX3Q96QZ0 392 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ATOH8Q96SQ7 321 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 GPR21Q99679 349 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CCT7Q99832 543 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 C1QTNF3Q9BXJ4 246 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ASB8Q9H765 288 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 DUS2Q9NX74 493 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 GDE1Q9NZC3 331 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 PKD2L2Q9NZM6 624 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CRLS1Q9UJA2 301 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 DHRS7Q9Y394 339 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CHRNGP07510 517 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 FGF4P08620 206 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CTPS1P17812 591 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 SP100P23497 879 aaPredicted RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 MPSTP25325 297 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ACRV1P26436 265 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 COPAP53621 1224 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ST8SIA6P61647 398 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 TIAL1Q01085 375 aaKnown RBP eCLIP16.24■□□□□ 0.19
LDB3-208ENST00000623007 EIF4HQ15056 248 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 PREPLQ4J6C6 727 aaPredicted RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 PTRHD1Q6GMV3 140 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 METTL2BQ6P1Q9 378 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 PAQR3Q6TCH7 311 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 MAVSQ7Z434 540 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ADIPOR2Q86V24 386 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 PIM3Q86V86 326 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 PIANPQ8IYJ0 282 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 LSMEM2Q8N112 164 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 SPATA6LQ8N4H0 392 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 KIF2BQ8N4N8 673 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 CPSF7Q8N684 471 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 ACTRT2Q8TDY3 377 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 RPL10LQ96L21 214 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 BPIFA1Q9NP55 256 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 DKK3Q9UBP4 350 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 ZDHHC2Q9UIJ5 367 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
LDB3-208ENST00000623007 TNPO3Q9Y5L0 923 aaKnown RBP16.24■□□□□ 0.19
LDB3-208ENST00000623007 TSPAN11A1L157 253 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 PRR5-ARHGAP8B1AHC4 643 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 GSC2O15499 205 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 KLK8O60259 260 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 VPS4BO75351 444 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 SUPT7LO94864 414 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ATP6V1G2O95670 118 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 MLYCDO95822 493 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
LDB3-208ENST00000623007 ALPIP09923 528 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CBSLP0DN79 551 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 THRAP10827 490 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ADH5P11766 374 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 GFAPP14136 432 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CEBPBP17676 345 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 NCF2P19878 526 aaPredicted RBP16.23■□□□□ 0.19
LDB3-208ENST00000623007 DGKAP23743 735 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CCND1P24385 295 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CBSP35520 551 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 NSG1P42857 185 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 DGKGP49619 791 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 INHBCP55103 352 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ARHGAP8P85298 464 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 ARHGEF7Q14155 803 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 HERC3Q15034 1050 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 PDGFRLQ15198 375 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 DHCR24Q15392 516 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 MACC1Q6ZN28 852 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 DPY19L3Q6ZPD9 716 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 TTC7BQ86TV6 843 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CUZD1Q86UP6 607 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 PACS2Q86VP3 889 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 LONP2Q86WA8 852 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 SERPINA9Q86WD7 417 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 CLYBLQ8N0X4 340 aa16.23■□□□□ 0.19
LDB3-208ENST00000623007 FBXO39Q8N4B4 442 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms