RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CHRNA6Q15825 494 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 AP5B1Q2VPB7 878 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 LVRNQ6Q4G3 990 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CCNI2Q6ZMN8 369 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 SPATA6LQ8N4H0 392 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 UBE2E3Q969T4 207 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 TSACCQ96A04 125 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 REPS1Q96D71 796 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 BORCS6Q96GS4 357 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 C1orf74Q96LT6 269 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 FBRSQ9HAH7 460 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 GPR34Q9UPC5 381 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 DOCK1Q14185 1865 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 FER1L6Q2WGJ9 1857 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 FFAR3O14843 346 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 GPR42O15529 346 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CD6P30203 668 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 ETV3P41162 512 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 TNFRSF4P43489 277 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 PRIM2P49643 509 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CAPN13Q6MZZ7 669 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 ARHGAP36Q6ZRI8 547 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CCDC197Q8NCU1 140 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 PPFIBP2Q8ND30 876 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 HIPK4Q8NE63 616 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 LMO3Q8TAP4 145 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 MTBPQ96DY7 904 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 ASPSCR1Q9BZE9 553 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 PABPC3Q9H361 631 aaKnown RBP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 SEMA4BQ9NPR2 832 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CALCOCO1Q9P1Z2 691 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 CYTH4Q9UIA0 394 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 VWA7Q9Y334 891 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 FAM186AA6NE01 2351 aa9.04□□□□□ -0.96
HDAC9-229ENST00000622668 BAG2O95816 211 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CPA3P15088 417 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF30P17039 623 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PBX1P40424 430 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 NCALDP61601 193 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PLOD1Q02809 727 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 NDUFA9Q16795 377 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 KLHDC10Q6PID8 442 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 TMPRSS11BQ86T26 416 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 GPR156Q8NFN8 814 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ELSPBP1Q96BH3 223 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF641Q96N77 438 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SERPINB12Q96P63 405 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SLC2A13Q96QE2 648 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 EBNA1BP2Q99848 306 aaKnown RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ADA2Q9NZK5 511 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 EPS15L1Q9UBC2 864 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ENTPD4Q9Y227 616 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 DLL1O00548 723 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 BCAT2O15382 392 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 FYNP06241 537 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ABCB1P08183 1280 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 HNRNPA2B1P22626 353 aaKnown RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CMPK1P30085 196 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 GRIA4P48058 902 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PIK3CGP48736 1102 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PRKAG1P54619 331 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 NME5P56597 212 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 OCA2Q04671 838 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SLC5A9Q2M3M2 681 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 LRIT3Q3SXY7 679 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 XKR4Q5GH76 650 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SNX30Q5VWJ9 437 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 NCBP2-AS2Q69YL0 99 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CLDN19Q8N6F1 224 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CMASQ8NFW8 434 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ZCCHC10Q8TBK6 192 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PWWP2AQ96N64 755 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 GPR21Q99679 349 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ILKAPQ9H0C8 392 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CRISPLD1Q9H336 500 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 MID1IP1Q9NPA3 183 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ALKBH4Q9NXW9 302 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 KLF15Q9UIH9 416 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SCML1Q9UN30 329 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PCDHB1Q9Y5F3 818 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 TCRBV7S2A1N4TA0A589 114 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 GUCY1B2O75343 617 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ECI2O75521 394 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CPSF4O95639 269 aaKnown RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 EGFP01133 1207 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 SRCP12931 536 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 HCAR3P49019 387 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CCR4P51679 360 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 CLDN2P57739 230 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PPIDQ08752 370 aaKnown RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ANKRD20A4Q4UJ75 823 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 INO80DQ53TQ3 878 aaPredicted RBP9.03□□□□□ -0.96
HDAC9-229ENST00000622668 PM20D1Q6GTS8 502 aa9.03□□□□□ -0.96
HDAC9-229ENST00000622668 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms