RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PSKH2Q96QS6 385 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 TTLL2Q9BWV7 592 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 TRIM54Q9BYV2 358 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 GRIP2Q9C0E4 1043 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 SEMA6AQ9H2E6 1030 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 NOL11Q9H8H0 719 aaKnown RBP9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 PFDN4Q9NQP4 134 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 OLAHQ9NV23 265 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 TUBA8Q9NY65 449 aaPredicted RBP9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 TAS2R13Q9NYV9 303 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 GMPR2Q9P2T1 348 aaKnown RBP9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 POLG2Q9UHN1 485 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 RNF112Q9ULX5 631 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC8A2Q9UPR5 921 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 MYRFQ9Y2G1 1151 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 SPO11Q9Y5K1 396 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 CEPT1Q9Y6K0 416 aa9.57□□□□□ -0.88
IGHV3-54-201ENST00000622166 A0A1W2PP18 115 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 DHRS12A0PJE2 317 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 MTMR11A4FU01 709 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TRIM64A6NGJ6 449 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 SUPT3HB4E1H0 165 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 F5H5T6 163 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 H3BNC9 293 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TBC1D4O60343 1298 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 SUPT3HO75486 399 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 NDUFS3O75489 264 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 EEDO75530 441 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TIPRLO75663 272 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GJB3O75712 270 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 SOAT2O75908 522 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CSPG5O95196 566 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 VNN2O95498 520 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 NPPAP01160 153 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 PYGLP06737 847 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 HMBSP08397 361 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 UROSP10746 265 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 UMPSP11172 480 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 FCGR1AP12314 374 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GFAPP14136 432 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 HGFP14210 728 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 IL10P22301 178 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 MYF6P23409 242 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GRIA3P42263 894 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZFP36L2P47974 494 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CDH4P55283 916 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 FCGRTP55899 365 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 NME5P56597 212 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GPR17Q13304 367 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GALNT3Q14435 633 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 RPS6KA2Q15349 733 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ATP6AP1Q15904 470 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 NRF1Q16656 503 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 VPS26BQ4G0F5 336 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TBCELQ5QJ74 424 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 FAM219BQ5XKK7 198 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 SYVN1Q86TM6 617 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 MIB1Q86YT6 1006 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CAMK1DQ8IU85 385 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 DDIASQ8IXT1 998 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TTC9BQ8N6N2 239 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 PCSK9Q8NBP7 692 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ATAD1Q8NBU5 361 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TRPV3Q8NET8 790 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 C2orf15Q8WU43 125 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TFAP2CQ92754 450 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TUBGCP3Q96CW5 907 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CEP295NLQ96MC4 621 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 FAM193BQ96PV7 902 aaPredicted RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CDK5RAP1Q96SZ6 601 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 CCT7Q99832 543 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 TMEM79Q9BSE2 394 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 C9orf16Q9BUW7 83 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 BRINP2Q9C0B6 783 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 AGPAT4Q9NRZ5 378 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ZIM2Q9NZV7 527 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 ATXN10Q9UBB4 475 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 UBA2Q9UBT2 640 aaPredicted RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 PTBP2Q9UKA9 531 aaKnown RBP9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 IKZF3Q9UKT9 509 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 GABRQQ9UN88 632 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 COMMD10Q9Y6G5 202 aa9.56□□□□□ -0.88
IGHV3-54-201ENST00000622166 MYOCOSA0A1B0GUC4 107 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 TCRBV5S2A0A599 114 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 KANSL1LA0AUZ9 987 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 ASPDHA6ND91 283 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 SLC38A8A6NNN8 435 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 H7C4K7 107 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 PLOD2O00469 737 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 DLGAP1O14490 977 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 SOCS2O14508 198 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 ARPC2O15144 300 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 PFDN6O15212 129 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 INSIG1O15503 277 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 VPS26AO75436 327 aa9.55□□□□□ -0.88
IGHV3-54-201ENST00000622166 TMCC1O94876 653 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms