RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ALDH1A2O94788 518 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 PAX3P23760 479 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 CRHR1P34998 444 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 FOXA1P55317 472 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SNRPD1P62314 119 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 SLC18A2Q05940 514 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 NCEH1Q6PIU2 408 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 TXNDC11Q6PKC3 985 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 HTR3DQ70Z44 454 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 ADIPOR2Q86V24 386 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 SLC22A15Q8IZD6 547 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 OR9I1Q8NGQ6 314 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 OR2A12Q8NGT7 310 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 ZNF398Q8TD17 642 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 ALG14Q96F25 216 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 RIOK2Q9BVS4 552 aaKnown RBP10.48□□□□□ -0.73
VPS11-208ENST00000621676 DCDC2Q9UHG0 476 aa10.48□□□□□ -0.73
VPS11-208ENST00000621676 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 TMEM202A6NGA9 273 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 TRIM13O60858 407 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 SIN3BO75182 1162 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 ZNF821O75541 412 aaPredicted RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 CTSLP07711 333 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 LINC00032P0C843 101 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 HLA-DPA1P20036 260 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 RASA2Q15283 850 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 OR4D1Q15615 310 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 UGT3A1Q6NUS8 523 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 CRTC1Q6UUV9 634 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 FAM156AQ8NDB6 213 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 JPH3Q8WXH2 748 aaPredicted RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 C1orf50Q9BV19 199 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 TM9SF1O15321 606 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 EFEMP2O95967 443 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 ESRRAP11474 423 aaPredicted RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 EFNA1P20827 205 aaPredicted RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 ATAT1Q5SQI0 421 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 EGFLAMQ63HQ2 1017 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 Q6ZNB5 142 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 HSD11B1LQ7Z5J1 315 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 MILR1Q7Z6M3 343 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 PIGWQ7Z7B1 504 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 TREML1Q86YW5 311 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 WDR75Q8IWA0 830 aaKnown RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 DCAF4L2Q8NA75 395 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 SEZ6LQ9BYH1 1024 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 CLPBQ9H078 707 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 OSGEPL1Q9H4B0 414 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 MID1IP1Q9NPA3 183 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 TRMT6Q9UJA5 497 aaKnown RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 OR51B4Q9Y5P0 310 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 NLRC5Q86WI3 1866 aa10.47□□□□□ -0.73
VPS11-208ENST00000621676 NYNRINQ9P2P1 1898 aaKnown RBP10.47□□□□□ -0.73
VPS11-208ENST00000621676 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 VGLL3A8MV65 326 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 B2RBV5 119 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 CCNT2O60583 730 aaKnown RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 PEX11AO75192 247 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 GSRP00390 522 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 KRT16P08779 473 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 RAD51Q06609 339 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 SF1Q15637 639 aaKnown RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 UGP2Q16851 508 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 ZNF542PQ5EBM4 170 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 ATG16L1Q676U5 607 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 STEAP4Q687X5 459 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 CDYL2Q8N8U2 506 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 PCDH12Q9NPG4 1184 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 ARHGAP26Q9UNA1 814 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 GLYATL1P3A0A0U1RQE8 302 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 RNASEH2AO75792 299 aaKnown RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 PGLSO95336 258 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 ITPKAP23677 461 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 HSPA7P48741 367 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 HYAL1Q12794 435 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 RBBP7Q16576 425 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 HSF5Q4G112 596 aaPredicted RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 CES5AQ6NT32 575 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 FAM180BQ6P0A1 224 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 FAM20CQ8IXL6 584 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 FIBINQ8TAL6 211 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 PIH1D2Q8WWB5 315 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 CCT6BQ92526 530 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 GFM2Q969S9 779 aaKnown RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 UHRF1Q96T88 793 aaPredicted RBP10.46□□□□□ -0.73
VPS11-208ENST00000621676 GPR22Q99680 433 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 THTPAQ9BU02 230 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 CCDC167Q9P0B6 97 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 SSX2IPQ9Y2D8 614 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 ASB3Q9Y575 518 aa10.46□□□□□ -0.73
VPS11-208ENST00000621676 CACNA1HO95180 2353 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms