RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 STAMBPL1Q96FJ0 436 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 PLEKHG4BQ96PX9 1271 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 APOOQ9BUR5 198 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 FAM114A2Q9NRY5 505 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 MARCH4Q9P2E8 410 aaPredicted RBP13.55□□□□□ -0.24
NEK3-210ENST00000620675 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 HS3ST3A1Q9Y663 406 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 RPS6KL1Q9Y6S9 549 aa13.55□□□□□ -0.24
NEK3-210ENST00000620675 CNOT1A5YKK6 2376 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 TMEM202A6NGA9 273 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 PPFIA2O75334 1257 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 PIAS1O75925 651 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 SRP72O76094 671 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 GOT2P00505 430 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 FUCA1P04066 466 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 CFIP05156 583 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 FAM153BP0C7A2 387 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 POLD2P49005 469 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 CDK3Q00526 305 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 FAM153CQ494X1 144 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 ZNF542PQ5EBM4 170 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 KYAT3Q6YP21 454 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 C9orf72Q96LT7 481 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 SAMD15Q9P1V8 674 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 KLF15Q9UIH9 416 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TMEM98Q9Y2Y6 226 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 A0A1B0GTW7 788 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 RGSL1A5PLK6 1076 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 VAPBO95292 243 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 AFF3P51826 1226 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 IRX4P78413 519 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TCEA2Q15560 299 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TRIM61Q5EBN2 209 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 PLA2G2CQ5R387 149 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 UNC5AQ6ZN44 842 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 ASCL5Q7RTU5 278 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TRAM1L1Q8N609 369 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 OR6P1Q8NGX9 317 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 ASB8Q9H765 288 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 WDR26Q9H7D7 661 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
NEK3-210ENST00000620675 PARD6AQ9NPB6 346 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 GPR27Q9NS67 375 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 RXFP3Q9NSD7 469 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 SLC17A6Q9P2U8 582 aa13.54□□□□□ -0.24
NEK3-210ENST00000620675 FAM237BA0A1B0GVD1 139 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 A6NNZ2 444 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 H7C0S8 307 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 SMAPO00193 183 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 AP3B1O00203 1094 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 LMNAP02545 664 aaKnown RBP13.53□□□□□ -0.24
NEK3-210ENST00000620675 TSHRP16473 764 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 FOXN2P32314 431 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 PDE1BQ01064 536 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 SPEM2Q0P670 501 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 NFATC2Q13469 925 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 CRYMQ14894 314 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 SF3A2Q15428 464 aaKnown RBP13.53□□□□□ -0.24
NEK3-210ENST00000620675 ZRANB3Q5FWF4 1079 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 DOK6Q6PKX4 331 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 ZNF398Q8TD17 642 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 KLHDC7BQ96G42 594 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 COX14Q96I36 57 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 ZSCAN5AQ9BUG6 496 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 TCEAL2Q9H3H9 227 aaPredicted RBP13.53□□□□□ -0.24
NEK3-210ENST00000620675 CAPN10Q9HC96 672 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.53□□□□□ -0.24
NEK3-210ENST00000620675 ANKRD12Q6UB98 2062 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
NEK3-210ENST00000620675 TLR4O00206 839 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 SSTR1P30872 391 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 NUDT1P36639 197 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 HADHAP40939 763 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 VSNL1P62760 191 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 CAV1Q03135 178 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 FZD2Q14332 565 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.24
NEK3-210ENST00000620675 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 NLRP8Q86W28 1048 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 IFT20Q8IY31 132 aa13.52□□□□□ -0.24
NEK3-210ENST00000620675 RAVER1Q8IY67 606 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms