RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 LYPLAL1Q5VWZ2 237 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 KIAA1161Q6NSJ0 714 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 FAM151BQ6UXP7 276 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 PACS1Q6VY07 963 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CERS6Q6ZMG9 384 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 MICALCLQ6ZW33 695 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 TAS2R42Q7RTR8 314 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 STRA8Q7Z7C7 330 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 FAM124AQ86V42 546 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 HORMAD1Q86X24 394 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 DENND6AQ8IWF6 608 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 PIANPQ8IYJ0 282 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CNPY4Q8N129 248 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 RIBC1Q8N443 379 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 TRAM1L1Q8N609 369 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 OR2T34Q8NGX1 318 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 EPS8L3Q8TE67 593 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 DCAKDQ8WVC6 231 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SCAMP4Q969E2 229 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 AP2M1Q96CW1 435 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 RUFY1Q96T51 708 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 PAFAH2Q99487 392 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 MCMBPQ9BTE3 642 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 RIOK2Q9BVS4 552 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SPATA16Q9BXB7 569 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 SLC17A9Q9BYT1 436 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 FAM96AQ9H5X1 160 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A7Q9HAW7 530 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A10Q9HAW8 530 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 UGT1A8Q9HAW9 530 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 TMBIM4Q9HC24 238 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 WSB2Q9NYS7 404 aaPredicted RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 CD84Q9UIB8 345 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF180Q9UJW8 692 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 ZFR2Q9UPR6 939 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 FNDC3AQ9Y2H6 1198 aaKnown RBP7.98□□□□□ -1.13
CPNE3-209ENST00000620393 COQ6Q9Y2Z9 468 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 PSAT1Q9Y617 370 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 IKBKGQ9Y6K9 419 aa7.98□□□□□ -1.13
CPNE3-209ENST00000620393 MUC22E2RYF6 1773 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 FAM47DPA6NHR8 397 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SMIM23A6NLE4 172 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 K7ESF4 209 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PFDN6O15212 129 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 FAM155BO75949 473 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 HAUS5O94927 633 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PRAMEF1O95521 474 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SEMA4FO95754 770 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PAK4O96013 591 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SNRPAP09012 282 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 MYZAPP0CAP1 466 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PRSS56P0CW18 603 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CNTFP26441 200 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CD6P30203 668 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CA5AP35218 305 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SPRP35270 261 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PPARGP37231 505 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SLC1A2P43004 574 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TTPAP49638 278 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CSE1LP55060 971 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 MPP1Q00013 466 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 DNAJC3Q13217 504 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 ITGA9Q13797 1035 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 FGL2Q14314 439 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SEMA3AQ14563 771 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SMAD1Q15797 465 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TYSND1Q2T9J0 566 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 WSCD2Q2TBF2 565 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 ATP13A5Q4VNC0 1218 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SETMARQ53H47 684 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TNFAIP8L3Q5GJ75 292 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 AARS2Q5JTZ9 985 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SEL1L3Q68CR1 1132 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 ZNF470Q6ECI4 717 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PSAPL1Q6NUJ1 521 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 BMP8AQ7Z5Y6 402 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 LDB1Q86U70 411 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SERPINA9Q86WD7 417 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TRIM69Q86WT6 500 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CYP4X1Q8N118 509 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 OTUD6BQ8N6M0 293 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 PNPLA1Q8N8W4 532 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 BTN2A2Q8WVV5 523 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.97□□□□□ -1.133e-6■■■■□ 20.9
CPNE3-209ENST00000620393 ZBTB9Q96C00 473 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 ULK4Q96C45 1275 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TOE1Q96GM8 510 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 LENG8Q96PV6 779 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 TTC1Q99614 292 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SH3GL2Q99962 352 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 ZSCAN5AQ9BUG6 496 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 RHOJQ9H4E5 214 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 CD93Q9NPY3 652 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 INTS10Q9NVR2 710 aaKnown RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SPATA6Q9NWH7 488 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-209ENST00000620393 SMOXQ9NWM0 555 aa7.97□□□□□ -1.13
CPNE3-209ENST00000620393 EURLQ9NYK6 297 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms