RNA–Protein interactions for RNA: ENST00000619976.1

SYNRG-227, Transcript of synergin gamma, human

TSL 2

Gene SYNRG, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-227	ENST00000619976	DXO	O77932	396 aa	Known RBP	27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	SLC4A1	P02730	911 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	ACTR1B	P42025	376 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	ATP5O	P48047	213 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	MAZ	P56270	477 aa	Known RBP	27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	WNT3A	P56704	352 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	RWDD2B	P57060	319 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	ACTR1A	P61163	376 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	PEX6	Q13608	980 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	NOMO1	Q15155	1222 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	KDELC1	Q6UW63	502 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	GPR26	Q8NDV2	337 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	FCRL5	Q96RD9	977 aa		27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976	SRPK1	Q96SB4	655 aa	Known RBP	27.58	■■■□□ 2.01
SYNRG-227	ENST00000619976		D6RAR5	112 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976		F5H423	210 aa	Predicted RBP	27.57	■■■□□ 2
SYNRG-227	ENST00000619976	PTPN7	P35236	360 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	DCDC1	P59894	354 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	SPRED1	Q7Z699	444 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	ZNF578	Q96N58	590 aa	Predicted RBP	27.57	■■■□□ 2
SYNRG-227	ENST00000619976	SPATA16	Q9BXB7	569 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	RAD18	Q9NS91	495 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	ZNHIT2	Q9UHR6	403 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	TRHDE	Q9UKU6	1024 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	SPO11	Q9Y5K1	396 aa		27.57	■■■□□ 2
SYNRG-227	ENST00000619976	LOC285095	A0A1B0GVY8	99 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	DNAJC6	O75061	913 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	ECEL1	O95672	775 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	OTUD4	Q01804	1114 aa	Known RBP	27.56	■■■□□ 2
SYNRG-227	ENST00000619976	ALS2CL	Q60I27	953 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	B3GNT8	Q7Z7M8	397 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	TXLNB	Q8N3L3	684 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	ACTL9	Q8TC94	416 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	ALG3	Q92685	438 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	OXNAD1	Q96HP4	312 aa	Predicted RBP	27.56	■■■□□ 2
SYNRG-227	ENST00000619976	DESI2	Q9BSY9	194 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	C10orf88	Q9H8K7	445 aa		27.56	■■■□□ 2
SYNRG-227	ENST00000619976	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	27.56	■■■□□ 2
SYNRG-227	ENST00000619976	MACROD2	A1Z1Q3	448 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	RRP8	O43159	456 aa	Known RBP	27.55	■■■□□ 2
SYNRG-227	ENST00000619976	EPO	P01588	193 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	RBL1	P28749	1068 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	CETN2	P41208	172 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	TNNT3	P45378	269 aa	Predicted RBP	27.55	■■■□□ 2
SYNRG-227	ENST00000619976	KIF5A	Q12840	1032 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	LRP8	Q14114	963 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	LRRC69	Q6ZNQ3	347 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	NAGS	Q8N159	534 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	ARL14	Q8N4G2	192 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	WDR36	Q8NI36	951 aa	Known RBP	27.55	■■■□□ 2
SYNRG-227	ENST00000619976	PATE1	Q8WXA2	126 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	MRGPRX2	Q96LB1	330 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	ZSCAN5A	Q9BUG6	496 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	ASCL3	Q9NQ33	180 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	TRIM10	Q9UDY6	481 aa		27.55	■■■□□ 2
SYNRG-227	ENST00000619976	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	27.55	■■■□□ 2
SYNRG-227	ENST00000619976	SCN8A	Q9UQD0	1980 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	CCDC187	A0A096LP49	1063 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	RHPN2P1	A8MT19	583 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	PYGM	P11217	842 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	ERVPABLB-1	P60509	514 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	ZNF569	Q5MCW4	686 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	AADACL2	Q6P093	401 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	IGF2-AS	Q6U949	168 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	LIN37	Q96GY3	246 aa	Predicted RBP	27.54	■■■□□ 2
SYNRG-227	ENST00000619976	PRR11	Q96HE9	360 aa	Predicted RBP	27.54	■■■□□ 2
SYNRG-227	ENST00000619976	FOXP3	Q9BZS1	431 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	RMI1	Q9H9A7	625 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	RSPH14	Q9UHP6	348 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	AMFR	Q9UKV5	643 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	27.54	■■■□□ 2
SYNRG-227	ENST00000619976	PRKAB1	Q9Y478	270 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	PCDHGA8	Q9Y5G5	932 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976	NBEA	Q8NFP9	2946 aa		27.54	■■■□□ 2
SYNRG-227	ENST00000619976		A0A0U1RQJ8	604 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	TMX2-CTNND1	H3BSU7	103 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	AURKA	O14965	403 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	BPI	P17213	487 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	ITPKB	P27987	946 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	CHRNA4	P43681	627 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	ABCG1	P45844	678 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	INHBC	P55103	352 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	B4GALNT1	Q00973	533 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	MPP3	Q13368	585 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	SIRPB2	Q5JXA9	342 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	FOXR1	Q6PIV2	292 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	PEX26	Q7Z412	305 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	ZNF438	Q7Z4V0	828 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	SLC25A41	Q8N5S1	370 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	TRAM1L1	Q8N609	369 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	IPMK	Q8NFU5	416 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	TMEM74	Q96NL1	305 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	SLC46A1	Q96NT5	459 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	FERMT1	Q9BQL6	677 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	EPB41L5	Q9HCM4	733 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	THSD1	Q9NS62	852 aa		27.53	■■■□□ 2
SYNRG-227	ENST00000619976	PMS2P1	A4D2B8	440 aa		27.52	■■■□□ 2
SYNRG-227	ENST00000619976	TJP3	O95049	919 aa		27.52	■■■□□ 2
SYNRG-227	ENST00000619976	SLC25A14	O95258	325 aa	Predicted RBP	27.52	■■■□□ 2
SYNRG-227	ENST00000619976	RBMS1	P29558	406 aa	Known RBP	27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms