RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SFRP1Q8N474 314 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ADGRE2Q9UHX3 823 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 GLYATL1P3A0A0U1RQE8 302 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ARHGEF33A8MVX0 844 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CLDN5O00501 218 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC35G6P0C7Q6 338 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PCSK2P16519 638 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 NT5EP21589 574 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 DACT2Q5SW24 774 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 MYOCQ99972 504 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 HOPXQ9BPY8 73 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 MCCC2Q9HCC0 563 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 GMFGO60234 142 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SNX4O95219 450 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 IDSP22304 550 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PDHA2P29803 388 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 MAXP61244 160 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 VSIG10LQ86VR7 867 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CFAP52Q8N1V2 620 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 NPEPPSL1A6NEC2 478 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 EML1O00423 815 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF132P52740 706 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CDK18Q07002 472 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 GALNTL5Q7Z4T8 443 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC35C1Q96A29 364 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 AGO3Q9H9G7 860 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CFAP97Q9P2B7 532 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PRPF19Q9UMS4 504 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PRMT5O14744 637 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 HDAC3O15379 428 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TGDSO95455 350 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 BLKP51451 505 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 GRSF1Q12849 480 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 NTRK3Q16288 839 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 DUS2Q9NX74 493 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CASRP41180 1078 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TBC1D21Q8IYX1 336 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 RBM4BQ9BQ04 359 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 ACAT2Q9BWD1 397 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 RBM4Q9BWF3 364 aaKnown RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 CHMP1AQ9HD42 196 aaPredicted RBP11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 IFT46Q9NQC8 304 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 HES2Q9Y543 173 aa11.12□□□□□ -0.63
CCDC144B-208ENST00000618081 EVPLQ92817 2033 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PGM3O95394 542 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PIRTP0C851 137 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SDC2P34741 201 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SPAM1P38567 509 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 IL18Q14116 193 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 IRGCQ6NXR0 463 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ERICH5Q6P6B1 374 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DNAAF5Q86Y56 855 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PSMA8Q8TAA3 256 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SPPL2BQ8TCT7 592 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 C15orf41Q9Y2V0 281 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CYP4B1P13584 511 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 FNBP1LQ5T0N5 605 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MSANTD2Q6P1R3 559 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 STYXQ8WUJ0 223 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 LMLNQ96KR4 655 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 NXF3Q9H4D5 531 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ANKZF1Q9H8Y5 726 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SNX15Q9NRS6 342 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PCDHGB5Q9Y5G0 923 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CYP3A7-CYP3A51PA0A087WV96 503 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DCLK1O15075 740 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 BUD23O43709 281 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 GJB6O95452 261 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CLDN9O95484 217 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DBTP11182 482 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CYP3A7P24462 503 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CORO1AP31146 461 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 GABRB2P47870 512 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 POMZP3Q6PJE2 187 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 NUP54Q7Z3B4 507 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ATP6V1C2Q8NEY4 427 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 PLEKHG4BQ96PX9 1271 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms