RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZFC3H1O60293 1989 aaKnown RBP8.57□□□□□ -1.04
GPC6-202ENST00000617456 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 UNC79Q9P2D8 2635 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 A0A1W2PQ67 120 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 TSPAN11A1L157 253 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ENO4A6NNW6 628 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 B4DGG1 531 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 RASA4BC9J798 803 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 RASA4O43374 803 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 BUB1O43683 1085 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 PCCBP05166 539 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 CR2P20023 1033 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 XPAP23025 273 aaPredicted RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 HTR1BP28222 390 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 SRP54P61011 504 aaKnown RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 POLR2LP62875 67 aaKnown RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 ZFP36L1Q07352 338 aaKnown RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 KCNAB2Q13303 367 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 CUL3Q13618 768 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 NFATC4Q14934 902 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 LRRC14Q15048 493 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 WSCD2Q2TBF2 565 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 AMZ1Q400G9 498 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ANO6Q4KMQ2 910 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ARMC3Q5W041 872 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 BORAQ6PGQ7 559 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 BRAT1Q6PJG6 821 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 TMPRSS9Q7Z410 1059 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 TAF8Q7Z7C8 310 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ZNF354CQ86Y25 554 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 DNAAF5Q86Y56 855 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 SFTPA2Q8IWL1 248 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 AOPEPQ8N6M6 819 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
GPC6-202ENST00000617456 OR6C4Q8NGE1 309 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ACMSDQ8TDX5 336 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 TMEM159Q96B96 161 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ZNF599Q96NL3 588 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 CMKLR1Q99788 373 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 OSBPL10Q9BXB5 764 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 SEMA6CQ9H3T2 930 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 NOL6Q9H6R4 1146 aaKnown RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 LRRC19Q9H756 370 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 ZNF304Q9HCX3 659 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 CIDEBQ9UHD4 219 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 OR1A2Q9Y585 309 aa8.56□□□□□ -1.04
GPC6-202ENST00000617456 RP1L1Q8IWN7 2480 aaPredicted RBP8.56□□□□□ -1.04
GPC6-202ENST00000617456 ARHGAP42A6NI28 874 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PRPSAP2O60256 369 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PRAMEF11O60813 436 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TMCC1O94876 653 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TNFP01375 233 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 FTLP02792 175 aaPredicted RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 CCL4P13236 92 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TIMP2P16035 220 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 IL4RP24394 825 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PSMA3P25788 255 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 NFKBIAP25963 317 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 RENBPP51606 427 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 POLE2P56282 527 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TUBA1BP68363 451 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PPIDQ08752 370 aaKnown RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 ARHGEF7Q14155 803 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 INPP5AQ14642 412 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 C16orf72Q14CZ0 275 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TMEM52BQ4KMG9 183 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 C4orf17Q53FE4 359 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 RALGPS1Q5JS13 557 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 CERCAMQ5T4B2 595 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TMEM164Q5U3C3 297 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 AFMIDQ63HM1 303 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 KCTD16Q68DU8 428 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 SCYL2Q6P3W7 929 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TUBA1AQ71U36 451 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 SPRED1Q7Z699 444 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 DTX1Q86Y01 620 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ARL6IP6Q8N6S5 226 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 FAM46DQ8NEK8 389 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 GPR156Q8NFN8 814 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PDXPQ96GD0 296 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 APOOQ9BUR5 198 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PARD6BQ9BYG5 372 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ADNPQ9H2P0 1102 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 HAUS4Q9H6D7 363 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ZWILCHQ9H900 591 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 PDFQ9HBH1 243 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ZNF71Q9NQZ8 489 aaPredicted RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 SEPT11Q9NVA2 429 aaKnown RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 AKAP7Q9P0M2 348 aaPredicted RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 LRIT1Q9P2V4 623 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 TMCO1Q9UM00 188 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 MAN2B2Q9Y2E5 1009 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 LUC7L2Q9Y383 392 aaKnown RBP8.55□□□□□ -1.04
GPC6-202ENST00000617456 SCN8AQ9UQD0 1980 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 RELNP78509 3460 aa8.55□□□□□ -1.04
GPC6-202ENST00000617456 ICE1Q9Y2F5 2266 aa8.54□□□□□ -1.04
GPC6-202ENST00000617456 CCDC162PA2VCL2 907 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms