RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 TGFB3P10600 412 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 PCNAP12004 261 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 KDELR1P24390 212 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 LSM3P62310 102 aaKnown RBP11.52□□□□□ -0.57
TP53-222ENST00000617185 PRKAA1Q13131 559 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 TAZQ16635 292 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 PPM1JQ5JR12 505 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 PRAMEF19Q5SWL8 479 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 FAM45BPQ6NSW5 357 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 PNCKQ6P2M8 343 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 NIPA2Q8N8Q9 360 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
TP53-222ENST00000617185 FAM45AQ8TCE6 357 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 TFAP2BQ92481 460 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.57
TP53-222ENST00000617185 TMEM80Q96HE8 168 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 SIGLEC10Q96LC7 697 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 MYRFLQ96LU7 910 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.57
TP53-222ENST00000617185 GATA5Q9BWX5 397 aaPredicted RBP11.52□□□□□ -0.57
TP53-222ENST00000617185 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 MIR1-1HGQ9H1L0 117 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 CHST12Q9NRB3 414 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 ATP6V1HQ9UI12 483 aa11.52□□□□□ -0.57
TP53-222ENST00000617185 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 AGAP5A6NIR3 686 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 G3V2L1 256 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 PDHXO00330 501 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 SGTAO43765 313 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ALDH4A1P30038 563 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 UQCRC1P31930 480 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ETV1P50549 477 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 CLDN10P78369 228 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 OGDHQ02218 1023 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TBRG1Q3YBR2 411 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 COLEC12Q5KU26 742 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 CLVS2Q5SYC1 327 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 MCUQ8NE86 351 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 APPL2Q8NEU8 664 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 VPS37AQ8NEZ2 397 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 HERVK_113Q902F9 699 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 FTHL17Q9BXU8 183 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 MMP27Q9H306 513 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 RSAD1Q9HA92 442 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 WASH6PQ9NQA3 447 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 CISHQ9NSE2 258 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 KRT87PA6NCN2 255 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 A8MV72 311 aaPredicted RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 LEUTXA8MZ59 168 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ZNF780AO75290 641 aaPredicted RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 SLC25A27O95847 323 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TRAPPC2P0DI81 140 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TRAPPC2BP0DI82 140 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 SLC7A2P52569 658 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ZNF45Q02386 682 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TAP1Q03518 808 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 GNA13Q14344 377 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 SMTNL2Q2TAL5 461 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 IER5Q5VY09 327 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 STRADAQ7RTN6 431 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 P2RY8Q86VZ1 359 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 SPPL2CQ8IUH8 684 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TTLQ8NG68 377 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 HSFY1Q96LI6 401 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 NODALQ96S42 347 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 REXO4Q9GZR2 422 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 ITM2CQ9NQX7 267 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ACTR3BQ9P1U1 418 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 NOSIPQ9Y314 301 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 PABPN1LA6NDY0 278 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 H0Y626 953 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 MRASO14807 208 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 AXIN1O15169 862 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 OGTO15294 1046 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 PIGNO95427 931 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 CALB1P05937 261 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 GPIP06744 558 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 HOXC6P09630 235 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 IL7P13232 177 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 PCMT1P22061 227 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 MMP8P22894 467 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 GTF2E2P29084 291 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 RFC2P35250 354 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 TALDO1P37837 337 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 MAGEA6P43360 314 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ST13P50502 369 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 TOP3AQ13472 1001 aaPredicted RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 HADHQ16836 314 aaKnown RBP11.51□□□□□ -0.57
TP53-222ENST00000617185 ZNF699Q32M78 642 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 C6orf141Q5SZD1 244 aa11.51□□□□□ -0.57
TP53-222ENST00000617185 HACD2Q6Y1H2 254 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms