RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TTKP33981 857 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 RFC2P35250 354 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 PPIL2Q13356 520 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MYRFLQ96LU7 910 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 TEKT5Q96M29 485 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 NSMCE2Q96MF7 247 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MEAF6Q9HAF1 191 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 SARS2Q9NP81 518 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 DDX28Q9NUL7 540 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 ARMC1Q9NVT9 282 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 ARID2Q68CP9 1835 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MAGEB16A2A368 324 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 DCLK1O15075 740 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 GSTA4O15217 222 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 SERPINB1P30740 379 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 FMO3P31513 532 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 HLCSP50747 726 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 KPNA2P52292 529 aaKnown RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 SIM2Q14190 667 aaPredicted RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 TECRLQ5HYJ1 363 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 NEK10Q6ZWH5 1172 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MILR1Q7Z6M3 343 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 ATPAF2Q8N5M1 289 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 OR13F1Q8NGS4 319 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
MSH6-214ENST00000616033 KLHL5Q96PQ7 755 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 IGSF5Q9NSI5 407 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
MSH6-214ENST00000616033 ENPP3O14638 875 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 TBX1O43435 398 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 PRSS56P0CW18 603 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ARNTP27540 789 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 PRDX3P30048 256 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 MTHFRP42898 656 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 NCS1P62166 190 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 FBXO47Q5MNV8 452 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 INTS11Q5TA45 600 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 TFAP2DQ7Z6R9 452 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 FAR2Q96K12 515 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 OSMRQ99650 979 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CCDC154A6NI56 674 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 A8MV72 311 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 FTH1P02794 183 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 AXLP30530 894 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 DGKQP52824 942 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CCNA1P78396 465 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CELF3Q5SZQ8 465 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 HECTD2Q5U5R9 776 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■□□□ 13.2
MSH6-214ENST00000616033 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 RAB2BQ8WUD1 216 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ISL2Q96A47 359 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 MYOCQ99972 504 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 GSTO2Q9H4Y5 243 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ACTR3BQ9P1U1 418 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 RECQL4O94761 1208 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 THRBP10828 461 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 PIGAP37287 484 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CDKN2DP55273 166 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 TRIM32Q13049 653 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 FAM45BPQ6NSW5 357 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 TAF2Q6P1X5 1199 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 SPARTQ8N0X7 666 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 POC5Q8NA72 575 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 FAM45AQ8TCE6 357 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
MSH6-214ENST00000616033 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
MSH6-214ENST00000616033 ADAMTS10Q9H324 1103 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms