RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RYBPQ8N488 228 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 APPL2Q8NEU8 664 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 DUS3LQ96G46 650 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 TMEM74Q96NL1 305 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 HOPXQ9BPY8 73 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 MKRN2Q9H000 416 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 PRDM8Q9NQV8 689 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 ANKEF1Q9NU02 776 aa10.34□□□□□ -0.75
TNFAIP3-208ENST00000615468 EFCAB9A8MZ26 197 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 H3BMM5 538 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 AXIN1O15169 862 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 FTH1P02794 183 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 NTRK1P04629 796 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 NR3C2P08235 984 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 IL4RP24394 825 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 RRM2P31350 389 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 IL12RB1P42701 662 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 GPLD1P80108 840 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 EMX1Q04741 257 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SPANXN2Q5MJ10 180 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ARMC4Q5T2S8 1044 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CYS1Q717R9 158 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 STRADAQ7RTN6 431 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 EFL1Q7Z2Z2 1120 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC22A15Q8IZD6 547 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CNIH3Q8TBE1 160 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MUL1Q969V5 352 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TUBGCP3Q96CW5 907 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 RTP4Q96DX8 246 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SPON1Q9HCB6 807 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 FBXO8Q9NRD0 319 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CMTM6Q9NX76 183 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 UBA2Q9UBT2 640 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 KCNN3Q9UGI6 736 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 U3KQV3 271 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 H0YCG3 227 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SCO1O75880 301 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CYP7B1O75881 506 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MICAL2O94851 1124 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 NDST3O95803 873 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TNNC2P02585 160 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MLNP12872 115 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRKACAP17612 351 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MAGEA6P43360 314 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 OR3A3P47888 321 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC9A3P48764 834 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ALDH3A2P51648 485 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CTBP1Q13363 440 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TPRG1LQ5T0D9 272 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 HS3ST5Q8IZT8 346 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ESX1Q8N693 406 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TP53I13Q8NBR0 393 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 HMGCLL1Q8TB92 370 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TMEM174Q8WUU8 243 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ITCHQ96J02 903 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC30A3Q99726 388 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZSCAN5AQ9BUG6 496 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 FTHL17Q9BXU8 183 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 DNAI2Q9GZS0 605 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLPBQ9H078 707 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ERVK-18Q9QC07 812 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 G3V2T6 193 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 NOS1APO75052 506 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ANGPTL1O95841 491 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PTTG1O95997 202 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PGK2P07205 417 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CYP4B1P13584 511 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CD36P16671 472 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRKACGP22612 351 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MTHFRP42898 656 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PSMD8P48556 350 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLCNKBP51801 687 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ATXN1P54253 815 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CDH13P55290 713 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CD83Q01151 205 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF181Q2M3W8 571 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 C9orf131Q5VYM1 1079 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRMT9Q6P2P2 845 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 GDPD3Q7L5L3 318 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CCDC185Q8N715 623 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 TXNDC5Q8NBS9 432 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CHDHQ8NE62 594 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SNAPC3Q92966 411 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 RHOBTB2Q9BYZ6 727 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 SCN3BQ9NY72 215 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 CNTN6Q9UQ52 1028 aa10.33□□□□□ -0.76
TNFAIP3-208ENST00000615468 A8MX80 341 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 AP3D1O14617 1153 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 RGS5O15539 181 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 DGAT1O75907 488 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 RPS12P25398 132 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 GRK3P35626 688 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 KCNAB2Q13303 367 aa10.32□□□□□ -0.76
TNFAIP3-208ENST00000615468 LAPTM5Q13571 262 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms