RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 OR9I1Q8NGQ6 314 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FNDC8Q8TC99 324 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FBXO32Q969P5 355 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C12orf43Q96C57 262 aaKnown RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TCF12Q99081 682 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PLXNA4Q9HCM2 1894 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 COQ6Q9Y2Z9 468 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ST14Q9Y5Y6 855 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CEPT1Q9Y6K0 416 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CXCL10P02778 98 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ALDH2P05091 517 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CR2P20023 1033 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CD247P20963 164 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OR1G1P47890 313 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PPP3CCP48454 512 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 EMP3P54852 163 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PPP1R8Q12972 351 aaKnown RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NOGQ13253 232 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AGKQ53H12 422 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HECTD2Q5U5R9 776 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SCN4BQ8IWT1 228 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PGAM4Q8N0Y7 254 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TXNDC5Q8NBS9 432 aaKnown RBP10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BPIFB6Q8NFQ5 453 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 OLFM1Q99784 485 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ADNPQ9H2P0 1102 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MYRFQ9Y2G1 1151 aa10.82□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NDUFB5O43674 189 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 KDELR3O43731 214 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 KDM1AO60341 852 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CNTN5O94779 1100 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TACR2P21452 398 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DPP6P42658 865 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NKX2-5P52952 324 aaPredicted RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TIAL1Q01085 375 aaKnown RBP eCLIP10.81□□□□□ -0.685e-8■■■□□ 16.5
SENP3-EIF4A1-201ENST00000614237 BFSP2Q13515 415 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CYP2A13Q16696 494 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FUT11Q495W5 492 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SPATS1Q496A3 300 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PIGGQ5H8A4 983 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 C8orf82Q6P1X6 216 aaPredicted RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SMYD1Q8NB12 490 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 DDHD1Q8NEL9 900 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PSMG2Q969U7 264 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TRMT2BQ96GJ1 504 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ELMO2Q96JJ3 720 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 KLHL25Q9H0H3 589 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MARCH7Q9H992 704 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SP110Q9HB58 689 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GIMAP2Q9UG22 337 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 BCAP29Q9UHQ4 241 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PMPCBO75439 489 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UGT1A1P22309 533 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UGT1A4P22310 534 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GRK4P32298 578 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UGT1A3P35503 534 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 UGT1A5P35504 534 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CD86P42081 329 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GPR15P49685 360 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TPD52P55327 224 aaPredicted RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 IL1RL1Q01638 556 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CNSTQ6PJW8 725 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AFAP1L2Q8N4X5 818 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FBXL20Q96IG2 436 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PSKH2Q96QS6 385 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZIC5Q96T25 663 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NT5MQ9NPB1 228 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MRPL40Q9NQ50 206 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NLE1Q9NVX2 485 aaPredicted RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RNF11Q9Y3C5 154 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 AP4S1Q9Y587 144 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PCDHB7Q9Y5E2 793 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SDHDO14521 159 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NOL3O60936 208 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RPP40O75818 363 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 RCVRNP35243 200 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HALP42357 657 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CHRNA4P43681 627 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ACADVLP49748 655 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TAF10Q12962 218 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NR1D2Q14995 579 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ZFP1Q6P2D0 407 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FUT10Q6P4F1 479 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 NPAS4Q8IUM7 802 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 HERC6Q8IVU3 1022 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 CHCHD4Q8N4Q1 142 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ELMO1Q92556 727 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 PHF21BQ96EK2 531 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 GPR62Q9BZJ7 368 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TFB2MQ9H5Q4 396 aaKnown RBP10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 MTRRQ9UBK8 725 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 TBC1D30Q9Y2I9 924 aa10.81□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 ILVBLA1L0T0 632 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 SLC38A8A6NNN8 435 aa10.8□□□□□ -0.68
SENP3-EIF4A1-201ENST00000614237 FBP2O00757 339 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms