RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 UGT1A10Q9HAW8 530 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 UGT1A8Q9HAW9 530 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 CYP4F12Q9HCS2 524 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 SPASTQ9UBP0 616 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 APOBEC3BQ9UH17 382 aaKnown RBP16.49■□□□□ 0.23
IRF1-211ENST00000613424 FKBPLQ9UIM3 349 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 TMPRSS11EQ9UL52 423 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 SLC17A4Q9Y2C5 497 aa16.49■□□□□ 0.23
IRF1-211ENST00000613424 OAS3Q9Y6K5 1087 aaKnown RBP16.49■□□□□ 0.23
IRF1-211ENST00000613424 DCHS1Q96JQ0 3298 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 PRSS38A1L453 326 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 MROH6A6NGR9 719 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 KIF2AO00139 706 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 SCAMP1O15126 338 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 AQP9O43315 295 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 SLC25A14O95258 325 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 ASMTLO95671 621 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 CTSEP14091 401 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 CSRP1P21291 193 aaKnown RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 ADCY8P40145 1251 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 HADHAP40939 763 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 GRK6P43250 576 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 XIAPP98170 497 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 DR1Q01658 176 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 C1orf61Q13536 156 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 PTK6Q13882 451 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
IRF1-211ENST00000613424 PRRT3Q5FWE3 981 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 LRRC8BQ6P9F7 803 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 SYDE1Q6ZW31 735 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 EID2Q8N6I1 236 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 ZNF548Q8NEK5 533 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 DEFB124Q8NES8 71 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 STYXQ8WUJ0 223 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 SCARF2Q96GP6 870 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 DNAJC1Q96KC8 554 aaKnown RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 TBATAQ96M53 351 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 RANBP9Q96S59 729 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 KRT12Q99456 494 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 LRRC61Q9BV99 259 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
IRF1-211ENST00000613424 ASIC3Q9UHC3 531 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 CDC23Q9UJX2 597 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 APPL1Q9UKG1 709 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 PCOLCE2Q9UKZ9 415 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 SUFUQ9UMX1 484 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 MYLKQ15746 1914 aa16.48■□□□□ 0.23
IRF1-211ENST00000613424 HEATR9A2RTY3 570 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 NEMP2A6NFY4 417 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 AP3B1O00203 1094 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 TTI1O43156 1089 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CBFA2T3O75081 653 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 GIMD1P0DJR0 217 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 ADRA1DP25100 572 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CA5AP35218 305 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 NPY2RP49146 381 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 SARNPP82979 210 aaKnown RBP16.47■□□□□ 0.23
IRF1-211ENST00000613424 PEX6Q13608 980 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 ZNF648Q5T619 568 aaPredicted RBP16.47■□□□□ 0.23
IRF1-211ENST00000613424 ZNF534Q76KX8 674 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 JAMLQ86YT9 394 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 ZNF398Q8TD17 642 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CDKN2AIPNLQ96HQ2 116 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 VPS35Q96QK1 796 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CLPBQ9H078 707 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 SLC32A1Q9H598 525 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 SUDS3Q9H7L9 328 aaPredicted RBP16.47■□□□□ 0.23
IRF1-211ENST00000613424 CARS2Q9HA77 564 aaKnown RBP16.47■□□□□ 0.23
IRF1-211ENST00000613424 TRIM39Q9HCM9 518 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CSNK1G3Q9Y6M4 447 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 LRP4O75096 1905 aa16.47■□□□□ 0.23
IRF1-211ENST00000613424 CCDC78A2IDD5 438 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 CCL22O00626 93 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 GPR39O43194 453 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 TMEM63AO94886 807 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 PRAMEF1O95521 474 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 IVLP07476 585 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 CELA2BP08218 269 aaPredicted RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 PSMA3P25788 255 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 IVDP26440 423 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 GNPDA1P46926 289 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 C2orf54Q08AI8 447 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 LAMB3Q13751 1172 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 DHX34Q14147 1143 aaKnown RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 ELOCQ15369 112 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 TCEA2Q15560 299 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 SKIDA1Q1XH10 827 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 INAVAQ3KP66 663 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 PCID2Q5JVF3 399 aa16.46■□□□□ 0.23
IRF1-211ENST00000613424 RNASEH2BQ5TBB1 312 aaKnown RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 MARK2Q7KZI7 788 aaKnown RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 ZNF572Q7Z3I7 529 aaPredicted RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
IRF1-211ENST00000613424 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms