RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FSTL5Q8N475 847 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 TMEM151AQ8N4L1 468 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 RAB3IL1Q8TBN0 382 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ZNF398Q8TD17 642 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ANKRD49Q8WVL7 239 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 PLEKHG4BQ96PX9 1271 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 TTC1Q99614 292 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ELAC2Q9BQ52 826 aaKnown RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 UBE2ZQ9H832 354 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 POPDC3Q9HBV1 291 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 PRSS16Q9NQE7 514 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CRLS1Q9UJA2 301 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 MED16Q9Y2X0 877 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 MTF2Q9Y483 593 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 AGAP14A8MT82 685 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 K7EQS6 105 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 SNX3O60493 162 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 IL1BP01584 269 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ESR1P03372 595 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CCDC166P0CW27 439 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 PKMP14618 531 aaKnown RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ACRV1P26436 265 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 MMP12P39900 470 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 SF3A3Q12874 501 aaKnown RBP eCLIP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ENPP2Q13822 863 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CSHL1Q14406 222 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CCDC85BQ15834 202 aaPredicted RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 CTSL3PQ5NE16 218 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 AGAP9Q5VTM2 703 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 LYPLAL1Q5VWZ2 237 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 LRRC8EQ6NSJ5 796 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 ARRDC3Q96B67 414 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 GRAMD1AQ96CP6 724 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 SCYL1Q96KG9 808 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 TSSK1BQ9BXA7 367 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 UNKQ9C0B0 810 aaKnown RBP12.23□□□□□ -0.45
CBWD1-220ENST00000612045 P2RY12Q9H244 342 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 TAS2R13Q9NYV9 303 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 COMMD10Q9Y6G5 202 aa12.23□□□□□ -0.45
CBWD1-220ENST00000612045 F5P12259 2224 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 SPECC1L-ADORA2AF8WAN1 911 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 TK2O00142 265 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 MBTPS2O43462 519 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 LTA4HP09960 611 aaKnown RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 SBK3P0C264 359 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 FGF3P11487 239 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 ZNF7P17097 686 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 KPNA2P52292 529 aaKnown RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 BST1Q10588 318 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 RALGDSQ12967 914 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 ATP13A5Q4VNC0 1218 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 SETMARQ53H47 684 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 CES4AQ5XG92 561 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 HSD11B1LQ7Z5J1 315 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 DSG4Q86SJ6 1040 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 MMAAQ8IVH4 418 aaKnown RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 CHPFQ8IZ52 775 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 RDH11Q8TC12 318 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 FAM136AQ96C01 138 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 PPP1R16AQ96I34 528 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 MRPL57Q9BQC6 102 aaKnown RBP12.22□□□□□ -0.45
CBWD1-220ENST00000612045 KCNK12Q9HB15 430 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 CD84Q9UIB8 345 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 MID2Q9UJV3 735 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 FAM50BQ9Y247 325 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 STON1Q9Y6Q2 735 aa12.22□□□□□ -0.45
CBWD1-220ENST00000612045 TARM1B6A8C7 271 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 NPC1O15118 1278 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 MYL2P10916 166 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 ZNF37AP17032 561 aaPredicted RBP12.21□□□□□ -0.45
CBWD1-220ENST00000612045 CD9P21926 228 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 RPS3P23396 243 aaKnown RBP eCLIP12.21□□□□□ -0.45
CBWD1-220ENST00000612045 CTHP32929 405 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 ETV3P41162 512 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
CBWD1-220ENST00000612045 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
CBWD1-220ENST00000612045 ACAP2Q15057 778 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 E2F5Q15329 346 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 KLC3Q6P597 504 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 FBXL19Q6PCT2 694 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 ZCCHC23Q6ZST2 131 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 CACNA2D3Q8IZS8 1091 aa12.21□□□□□ -0.45
CBWD1-220ENST00000612045 RBFAQ8N0V3 343 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms