RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ASPSCR1Q9BZE9 553 aa13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 PDP2Q9P2J9 529 aa13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 CNOT6Q9ULM6 557 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 CAPN11Q9UMQ6 739 aa13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 OAS3Q9Y6K5 1087 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-219ENST00000608621 HLA-DQB2P05538 268 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 CA4P22748 312 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 UBASH3AP57075 661 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 TAS2R40P59535 323 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 SLC10A2Q12908 348 aaPredicted RBP13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 CLCA4Q14CN2 919 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 PDK2Q15119 407 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 DCAF12Q5T6F0 453 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 RAVER1Q8IY67 606 aaKnown RBP13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 CACNA2D3Q8IZS8 1091 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 CCNYQ8ND76 341 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 OR10G6Q8NH81 332 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 NCSTNQ92542 709 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 FATE1Q969F0 183 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 LYSMD1Q96S90 227 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 MLPHQ9BV36 600 aaPredicted RBP13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 DDA1Q9BW61 102 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 TRIM4Q9C037 500 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 ZMYND15Q9H091 742 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 FAM83DQ9H4H8 585 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 VPS18Q9P253 973 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 TBC1D29Q9UFV1 150 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 IL17BQ9UHF5 180 aa13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 LUC7L2Q9Y383 392 aaKnown RBP13.27□□□□□ -0.29
POLR2J3-219ENST00000608621 C1orf232A0A0U1RR37 186 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 FADS2P1A8MWK0 482 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 B4E171 279 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 ANKRD66B4E2M5 251 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 SUV39H1O43463 412 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 DUX1O43812 170 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 RAD1O60671 282 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 PROSCO94903 275 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 JCHAINP01591 159 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 LIFP15018 202 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 TSPAN7P41732 249 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 SPINT3P49223 89 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 CSRP3P50461 194 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 RPL26P61254 145 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 HHEXQ03014 270 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 GBE1Q04446 702 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 NFATC2Q13469 925 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 QPCTQ16769 361 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 ANKS6Q68DC2 871 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 IYDQ6PHW0 289 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 ARHGAP22Q7Z5H3 698 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 PQLC3Q8N755 202 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 COL26A1Q96A83 441 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 ZNF670Q9BS34 389 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 SPRY4Q9C004 299 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 CBX8Q9HC52 389 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 SARS2Q9NP81 518 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 GEMIN8Q9NWZ8 242 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 KCNK6Q9Y257 313 aa13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 TLN1Q9Y490 2541 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-219ENST00000608621 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 SNX2O60749 519 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 PPFIA2O75334 1257 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 MMP2P08253 660 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 ACP5P13686 325 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 CD86P42081 329 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 RAB15P59190 212 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 TPM4P67936 248 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 MC2RQ01718 297 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 HENMT1Q5T8I9 393 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 WDR74Q6RFH5 385 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 SLC9B2Q86UD5 537 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 CCDC13Q8IYE1 715 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 BMPERQ8N8U9 685 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 CCHCR1Q8TD31 782 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 SH3KBP1Q96B97 665 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 CTRCQ99895 268 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 SLC25A18Q9H1K4 315 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 STN1Q9H668 368 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 DTLQ9NZJ0 730 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 PILRAQ9UKJ1 303 aa13.25□□□□□ -0.29
POLR2J3-219ENST00000608621 SPTA1P02549 2419 aa13.24□□□□□ -0.29
POLR2J3-219ENST00000608621 RGSL1A5PLK6 1076 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms