RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PPP1R13BQ96KQ4 1090 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 PDCL3Q9H2J4 239 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 RANBP17Q9H2T7 1088 aaKnown RBP4.24□□□□□ -1.73
HDDC2-207ENST00000608532 FKRPQ9H9S5 495 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 UPF2Q9HAU5 1272 aaKnown RBP4.24□□□□□ -1.73
HDDC2-207ENST00000608532 PREBQ9HCU5 417 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 UBN1Q9NPG3 1134 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 MAP3K20Q9NYL2 800 aaKnown RBP4.24□□□□□ -1.73
HDDC2-207ENST00000608532 DLGAP2Q9P1A6 1054 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 CNOT8Q9UFF9 292 aaKnown RBP4.24□□□□□ -1.73
HDDC2-207ENST00000608532 DLGAP4Q9Y2H0 992 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 MAU2Q9Y6X3 613 aa4.24□□□□□ -1.73
HDDC2-207ENST00000608532 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 M0QZ24 198 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 SEC14L2O76054 403 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 ATP1A3P13637 1013 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 CASP6P55212 293 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 OLR1P78380 273 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 COG7P83436 770 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 SREBF2Q12772 1141 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 TMEM115Q12893 351 aaPredicted RBP4.23□□□□□ -1.73
HDDC2-207ENST00000608532 CDC16Q13042 620 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 DPCR1Q3MIW9 517 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 CEP85LQ5SZL2 805 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 TSPYL6Q8N831 410 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 OR52I2Q8NH67 350 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 SLC44A1Q8WWI5 657 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 TAAR8Q969N4 342 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 INTS12Q96CB8 462 aaKnown RBP4.23□□□□□ -1.73
HDDC2-207ENST00000608532 MMABQ96EY8 250 aaPredicted RBP4.23□□□□□ -1.73
HDDC2-207ENST00000608532 SMC6Q96SB8 1091 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 NEURL2Q9BR09 285 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 FAM118AQ9NWS6 357 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 C9orf78Q9NZ63 289 aaPredicted RBP4.23□□□□□ -1.73
HDDC2-207ENST00000608532 ABI3Q9P2A4 366 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 OR14J1Q9UGF5 321 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 ACSL5Q9ULC5 683 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 GTF2A1LQ9UNN4 478 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 GAB2Q9UQC2 676 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 TCF19Q9Y242 345 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 WDR81Q562E7 1941 aa4.23□□□□□ -1.73
HDDC2-207ENST00000608532 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 NPIPB15A6NHN6 443 aaPredicted RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 TGFB1I1O43294 461 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 KCNK5O95279 499 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CFC1P0CG37 223 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 HOXC9P31274 260 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 FASLGP48023 281 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 GLIPR1P48060 266 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 HOXA1P49639 335 aaPredicted RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CRIP2P52943 208 aaPredicted RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CLDN20P56880 219 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 HILS1P60008 231 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 RPL7AP62424 266 aaKnown RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CEBPZQ03701 1054 aaKnown RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CCNG2Q16589 344 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 DECR1Q16698 335 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 CDONQ4KMG0 1287 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 C18orf63Q68DL7 685 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 ADAM5Q6NVV9 412 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
HDDC2-207ENST00000608532 ZNF354BQ96LW1 612 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 TBATAQ96M53 351 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 LRMDAQ9H2I8 198 aa4.22□□□□□ -1.73
HDDC2-207ENST00000608532 H3BQ06 376 aaPredicted RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 ANKRD28O15084 1053 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 ZG16O60844 167 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 PAK4O96013 591 aaPredicted RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 AMBPP02760 352 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 FAM106CPP0CH98 169 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 CD53P19397 219 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 UBA1P22314 1058 aaKnown RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 TIMP3P35625 211 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 CDKN1AP38936 164 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 PBX3P40426 434 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 MYLK3Q32MK0 819 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 GORABQ5T7V8 394 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 NRROSQ86YC3 692 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 DIS3L2Q8IYB7 885 aaKnown RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 EXOC8Q8IYI6 725 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 ADSSL1Q8N142 457 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 FAM149B1Q96BN6 582 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 SEC62Q99442 399 aaKnown RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
HDDC2-207ENST00000608532 RANGRFQ9HD47 186 aaPredicted RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 R3HDM2Q9Y2K5 976 aaKnown RBP4.21□□□□□ -1.74
HDDC2-207ENST00000608532 TAF1P21675 1872 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 A0A1W2PRG0 241 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 EIF3DO15371 548 aaKnown RBP eCLIP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 PAGE4O60829 102 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 JRKO75564 520 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 SLC25A12O75746 678 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 IPO7O95373 1038 aaKnown RBP4.2□□□□□ -1.74
HDDC2-207ENST00000608532 MLYCDO95822 493 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 CGAP01215 116 aa4.2□□□□□ -1.74
HDDC2-207ENST00000608532 FGF5P12034 268 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms