RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 HIST1H2AHQ96KK5 128 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TMEM209Q96SK2 561 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 HIST1H2AJQ99878 128 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 H2AFJQ9BTM1 129 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CACNA2D2Q9NY47 1150 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TBC1D3BA6NDS4 549 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 EVPLLA8MZ36 301 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 KPNA3O00505 521 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 NTRK1P04629 796 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ABCB1P08183 1280 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 SLC10A3P09131 477 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CNPP09543 421 aaKnown RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 PABPC4LP0CB38 370 aaKnown RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CCNCP24863 283 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 GABRR2P28476 465 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 STT3AP46977 705 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 DIO3P55073 304 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 BNIP3Q12983 259 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 PRKG2Q13237 762 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 SDE2Q6IQ49 451 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TTC23LQ6PF05 361 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TMEM135Q86UB9 458 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ASB9Q96DX5 294 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 RTP4Q96DX8 246 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 KLHL32Q96NJ5 620 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 C16orf70Q9BSU1 422 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TTPALQ9BTX7 342 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 GMIPQ9P107 970 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 INVSQ9Y283 1065 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 POLR3HQ9Y535 204 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 KNTC1P50748 2209 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TLR5O60602 858 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 SLC22A3O75751 556 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 BCAS2O75934 225 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ASLP04424 464 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CD1EP15812 388 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 EDNRBP24530 442 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ATP5C1P36542 298 aaKnown RBP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TRPC1P48995 793 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ENTPD1P49961 510 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 RAD23AP54725 363 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 CLCQ05315 142 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 ZNF792Q3KQV3 632 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 FOXB2Q5VYV0 432 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 RD3Q7Z3Z2 195 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 C14orf80Q86SX3 495 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTCFL-216ENST00000608263 SLC29A1Q99808 456 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TRIM54Q9BYV2 358 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 SLC25A13Q9UJS0 675 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 TMCO1Q9UM00 188 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 GIT1Q9Y2X7 761 aa10.32□□□□□ -0.76
CTCFL-216ENST00000608263 DLEC1Q9Y238 1755 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 PRORSD1PA6NEY8 169 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 GRID2O43424 1007 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 NOBOXO60393 691 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ESRRBO95718 433 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 IGFBP6P24592 240 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 POU1F1P28069 291 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 GHRHRQ02643 423 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 SULT2A1Q06520 285 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 SIM2Q14190 667 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 FAM187BQ17R55 369 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 CACHD1Q5VU97 1274 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 OGFOD2Q6N063 350 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 PAQR3Q6TCH7 311 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 TMEM26Q6ZUK4 368 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 HEATR4Q86WZ0 1026 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 CPSF7Q8N684 471 aaKnown RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ZFAND2BQ8WV99 257 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 TPD52L3Q96J77 140 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 VRTNQ9H8Y1 702 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 SCN3BQ9NY72 215 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 POLG2Q9UHN1 485 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 EIF2B4Q9UI10 523 aaKnown RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 LEF1Q9UJU2 399 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 A0A1W2PPW3 197 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 DCLK1O15075 740 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 KCNH1O95259 989 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 CST1P01037 141 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 EFNA1P20827 205 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ARRB2P32121 409 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 RHDQ02161 417 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 TAF10Q12962 218 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 TAZQ16635 292 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 AP5B1Q2VPB7 878 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 HSF5Q4G112 596 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 PRMT9Q6P2P2 845 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ITIH5Q86UX2 942 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ZCCHC7Q8N3Z6 543 aaKnown RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ZNF784Q8NCA9 323 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 ELMO1Q92556 727 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 DACT3Q96B18 629 aaPredicted RBP10.31□□□□□ -0.76
CTCFL-216ENST00000608263 PLGRKTQ9HBL7 147 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 UBAP1Q9NZ09 502 aa10.31□□□□□ -0.76
CTCFL-216ENST00000608263 SELENONQ9NZV5 590 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms