RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 UBA1P22314 1058 aaKnown RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 PON1P27169 355 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 PRCPP42785 496 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SUOXP51687 545 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SEC61A1P61619 476 aaKnown RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TUBA1BP68363 451 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZBED6P86452 979 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ACSM2AQ08AH3 577 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TRAF2Q12933 501 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 DLG1Q12959 904 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 CDC16Q13042 620 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 WTAPQ15007 396 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 PNLIPRP3Q17RR3 467 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZSCAN23Q3MJ62 389 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ATP13A5Q4VNC0 1218 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 PLEKHS1Q5SXH7 462 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 FRG2Q64ET8 278 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ACSM2BQ68CK6 577 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TMEM154Q6P9G4 183 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 KCTD18Q6PI47 426 aaPredicted RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 BRAT1Q6PJG6 821 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 ARMC9Q7Z3E5 817 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SPATA2LQ8IUW3 424 aaPredicted RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 HM13Q8TCT9 377 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TANKQ92844 425 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 LRRC59Q96AG4 307 aaKnown RBP3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 C3orf30Q96M34 536 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 GFI1Q99684 422 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 CMKLR1Q99788 373 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 TMEM204Q9BSN7 226 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 SMARCAD1Q9H4L7 1026 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 CMAHPQ9Y471 501 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 NFS1Q9Y697 457 aa3.86□□□□□ -1.79
RNU6-88P-201ENST00000606801 WDR81Q562E7 1941 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 OR2A25A4D2G3 310 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 OGG1O15527 345 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 PLPP2O43688 288 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 PMS2P2O95744 297 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 SRPRAP08240 638 aaKnown RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 TMEM11P17152 192 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 S1PR1P21453 382 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 UGT1A1P22309 533 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 GCH1P30793 250 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 CORO1AP31146 461 aaKnown RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 FASLGP48023 281 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 MMP14P50281 582 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 CLDN20P56880 219 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 ZXDBP98169 803 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 EPS8Q12929 822 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 CTF1Q16619 201 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 RILPL1Q5EBL4 403 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 RARS2Q5T160 578 aaKnown RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 DCST1Q5T197 706 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 C18orf63Q68DL7 685 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 PRSS57Q6UWY2 283 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 AACSQ86V21 672 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 C17orf53Q8N3J3 647 aaPredicted RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 RASGEF1CQ8N431 466 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 RBMXL3Q8N7X1 1067 aaKnown RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 ABTB1Q969K4 478 aaPredicted RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 TAAR8Q969N4 342 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 CENPOQ9BU64 300 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 CCDC68Q9H2F9 335 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 HIPK2Q9H2X6 1198 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 EPB41L5Q9HCM4 733 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 PLSCR4Q9NRQ2 329 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 TMEM30AQ9NV96 361 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 MCM9Q9NXL9 1143 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 SMARCAL1Q9NZC9 954 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 SEC63Q9UGP8 760 aaKnown RBP3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 SWAP70Q9UH65 585 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 FBXW11Q9UKB1 542 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
RNU6-88P-201ENST00000606801 SCN5AQ14524 2016 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 A0A1W2PP11 408 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 GOLGA6L9A6NEM1 432 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SMAD9O15198 467 aaKnown RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SPINT2O43291 252 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 ENTPD3O75355 529 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 HIST1H2ABP04908 130 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 HIST1H2ADP20671 130 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 CLCNKAP51800 687 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 GPR143P51810 404 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 TAS2R38P59533 333 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 IFI35P80217 286 aaPredicted RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 MRPS5P82675 430 aaKnown RBP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 ECT2LQ008S8 904 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 TFAP4Q01664 338 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 RUNX1T1Q06455 604 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 FOXM1Q08050 763 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SLC20A2Q08357 652 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SREBF2Q12772 1141 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 CHAF1BQ13112 559 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 PCLAFQ15004 111 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 TOMM20Q15388 145 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 SF3B4Q15427 424 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 DLG2Q15700 870 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
RNU6-88P-201ENST00000606801 RGMBQ6NW40 437 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms