RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 AMD1P17707 334 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 LHCGRP22888 699 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 RFC1P35251 1148 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 RPS15P62841 145 aaKnown RBP15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 KIR2DS5Q14953 304 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 USP45Q70EL2 814 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ZNF677Q86XU0 584 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 HPS6Q86YV9 775 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 CBARPQ8N350 705 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 EPS8L1Q8TE68 723 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 MARVELD3Q96A59 401 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 GPR87Q9BY21 358 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 CPNE7Q9UBL6 633 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 RWDD2AQ9UIY3 292 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 KCNK6Q9Y257 313 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PRKAB1Q9Y478 270 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 FHOD1Q9Y613 1164 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ESPL1Q14674 2120 aa15.23■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 CENPEQ02224 2701 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TTC24A2A3L6 582 aaPredicted RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 NPIPB15A6NHN6 443 aaPredicted RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 CCP110O43303 1012 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 HTRA2O43464 458 aaPredicted RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 FGF5P12034 268 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 IL10RBQ08334 325 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ZNF235Q14590 738 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 LBRQ14739 615 aaKnown RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TPD52L1Q16890 204 aaPredicted RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TECPR1Q7Z6L1 1165 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TSPAN33Q86UF1 283 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 NDUFAF2Q8N183 169 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 EXD1Q8NHP7 514 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PNPLA2Q96AD5 504 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SCRN2Q96FV2 425 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PSKH2Q96QS6 385 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 BRD8Q9H0E9 1235 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ABCG8Q9H221 673 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PDE7BQ9NP56 450 aa15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TNRC6AQ8NDV7 1962 aaKnown RBP15.22■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ARHGAP10A1A4S6 786 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 EEF2KO00418 725 aaKnown RBP15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PES1O00541 588 aaKnown RBP15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 UBXN7O94888 489 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SOD1P00441 154 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 CYP1A1P04798 512 aaPredicted RBP15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ACP5P13686 325 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 TYRP1P17643 537 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PTPN4P29074 926 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 RPS18P62269 152 aaKnown RBP15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PDE1BQ01064 536 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 MAN2A1Q16706 1144 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 KLHDC7AQ5VTJ3 777 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SLC6A19Q695T7 634 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 PHYKPLQ8IUZ5 450 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 Q8NA96 180 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 SCAMP4Q969E2 229 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 NSMCE3Q96MG7 304 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ADAM22Q9P0K1 906 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 VPS18Q9P253 973 aa15.21■□□□□ 0.03
NEDD8-MDP1-204ENST00000605847 ABCA12Q86UK0 2595 aa15.21■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 MED13Q9UHV7 2174 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 ANKUB1A6NFN9 424 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 KRT86O43790 486 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 DNAJC6O75061 913 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 CBX6O95503 412 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 VIPP01282 170 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 ATP1A1P05023 1023 aaKnown RBP15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 CTPS1P17812 591 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 GRNP28799 593 aaKnown RBP15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 CDR2Q01850 454 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 ARMC12Q5T9G4 340 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 TMCO4Q5TGY1 634 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 CACHD1Q5VU97 1274 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 FAM199XQ6PEV8 388 aaPredicted RBP15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 ARHGAP36Q6ZRI8 547 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 TRIM48Q8IWZ4 208 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 IQCKQ8N0W5 287 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 BBS5Q8N3I7 341 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 SLC20A1Q8WUM9 679 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 C19orf60Q96EN9 201 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 RUFY1Q96T51 708 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 RARRES3Q9UL19 164 aa15.2■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 F8VZ95 297 aa15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 UCHL3P15374 230 aa15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 TNFAIP3P21580 790 aa15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 HSPA9P38646 679 aaKnown RBP15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 PTGIRP43119 386 aa15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
NEDD8-MDP1-204ENST00000605847 SLC10A7Q0GE19 358 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms