RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 TOR1BO14657 336 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 FPGTO14772 594 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A9O60656 530 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 LILRB5O75023 590 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 C1QAP02745 245 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PCCBP05166 539 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 H2AFXP16104 143 aaPredicted RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A6P19224 532 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 OGNP20774 298 aaKnown RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A1P22309 533 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A4P22310 534 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A3P35503 534 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A5P35504 534 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 IGFALSP35858 605 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 SRSF5Q13243 272 aaKnown RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 SLC29A2Q14542 456 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 INPP5AQ14642 412 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UAP1Q16222 522 aaPredicted RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 AARS2Q5JTZ9 985 aaKnown RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 UBAP2Q5T6F2 1119 aaKnown RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 LYPLAL1Q5VWZ2 237 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 CERS6Q6ZMG9 384 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 MICALCLQ6ZW33 695 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PIANPQ8IYJ0 282 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 TMEFF1Q8IYR6 380 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PELI3Q8N2H9 469 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 DEFB119Q8N690 84 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PLA2G15Q8NCC3 412 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 FAM174AQ8TBP5 190 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 BTN2A2Q8WVV5 523 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UBLCP1Q8WVY7 318 aaPredicted RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 SNX19Q92543 992 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 CDKL2Q92772 493 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 TCF12Q99081 682 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PRRX2Q99811 253 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 ACSS3Q9H6R3 686 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A7Q9HAW7 530 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A10Q9HAW8 530 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 UGT1A8Q9HAW9 530 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 FZD3Q9NPG1 666 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 ARGLU1Q9NWB6 273 aaPredicted RBP14.25□□□□□ -0.13
UPF1-211ENST00000600868 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 RABGEF1Q9UJ41 708 aa14.25□□□□□ -0.13
UPF1-211ENST00000600868 ABCA7Q8IZY2 2146 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 MEI4A8MW99 385 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 GPR39O43194 453 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 HOXC4P09017 264 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 HSD17B3P37058 310 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 PPARGP37231 505 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 TTPAP49638 278 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 CDKN1CP49918 316 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 NAB1Q13506 487 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TYSND1Q2T9J0 566 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 KBTBD12Q3ZCT8 623 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 PLK5Q496M5 336 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 WDR45BQ5MNZ6 344 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 LDLRAP1Q5SW96 308 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TEDDM1Q5T9Z0 273 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 ZNF470Q6ECI4 717 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 PSAPL1Q6NUJ1 521 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 KIAA0408Q6ZU52 694 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TAS2R42Q7RTR8 314 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 GALNT7Q86SF2 657 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 SDCCAG8Q86SQ7 713 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 CILP2Q8IUL8 1156 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 NXPE1Q8N323 547 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 C2CD4AQ8NCU7 369 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 DDHD1Q8NEL9 900 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 GLYATL1Q969I3 302 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 COX14Q96I36 57 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 SERAC1Q96JX3 654 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 BMFQ96LC9 184 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 CYTH2Q99418 400 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TTC1Q99614 292 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TEX101Q9BY14 249 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 FAM96AQ9H5X1 160 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 IARS2Q9NSE4 1012 aaKnown RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 NSMCE4AQ9NXX6 385 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 ZFATQ9P243 1243 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 MARCH4Q9P2E8 410 aaPredicted RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 CRLS1Q9UJA2 301 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 TMPRSS11EQ9UL52 423 aa14.24□□□□□ -0.13
UPF1-211ENST00000600868 CNOT6Q9ULM6 557 aaKnown RBP14.24□□□□□ -0.13
UPF1-211ENST00000600868 BPTFQ12830 3046 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 POM121BA6NF01 834 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 PFDN6O15212 129 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 SLC25A14O95258 325 aaPredicted RBP14.23□□□□□ -0.13
UPF1-211ENST00000600868 PRSS56P0CW18 603 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 ACRV1P26436 265 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 PMLP29590 882 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 CA5AP35218 305 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 PTGER3P43115 390 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 PFN3P60673 137 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 YPEL5P62699 121 aa14.23□□□□□ -0.13
UPF1-211ENST00000600868 RACK1P63244 317 aaKnown RBP14.23□□□□□ -0.13
UPF1-211ENST00000600868 CDK3Q00526 305 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms