RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ECI2O75521 394 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 CAPN15O75808 1086 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 CDK14O94921 469 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 MT-ND1P03886 318 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 ACRP10323 421 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 IMPDH1P20839 514 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 CSKP41240 450 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 RPS6KA3P51812 740 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 DIO3P55073 304 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 POM121L1PQ3SYA9 428 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 ARHGAP22Q7Z5H3 698 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 DNAJB7Q7Z6W7 309 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 DNAJB14Q8TBM8 379 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 WFDC5Q8TCV5 224 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 MIPOL1Q8TD10 442 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 EME1Q96AY2 570 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 CLSTN3Q9BQT9 956 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 PDP2Q9P2J9 529 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 CEP290O15078 2479 aa11.48□□□□□ -0.57
ARHGEF1-220ENST00000600274 AZIN1O14977 448 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 ANGPT2O15123 496 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 VPS26AO75436 327 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 CLDN11O75508 207 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 SNRPB2P08579 225 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 LPOP22079 712 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 UGT3A1Q6NUS8 523 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRIM74Q86UV6 250 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRIM73Q86UV7 250 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 SATL1Q86VE3 508 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PQLC1Q8N2U9 271 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 JADE3Q92613 823 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 UBXN10Q96LJ8 280 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 AARSD1Q9BTE6 412 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 HGH1Q9BTY7 390 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PKP3Q9Y446 797 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 DNAJC15Q9Y5T4 150 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 SQORQ9Y6N5 450 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 A0A1B0GVM2 712 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 LIN7AO14910 233 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PAX3P23760 479 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 KPNA1P52294 538 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 STX5Q13190 355 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 ADGRF1Q5T601 910 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 SETD3Q86TU7 594 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 EZH1Q92800 747 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PKP2Q99959 881 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 LATS2Q9NRM7 1088 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 HACD3Q9P035 362 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 A0A0J9YYE9 177 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 C1orf232A0A0U1RR37 186 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 FFAR3O14843 346 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 GPR42O15529 346 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 HNRNPRO43390 633 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PSMC3P17980 439 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 GABRR2P28476 465 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 GRIA3P42263 894 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 HERVK_113P63132 956 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRIM60Q495X7 471 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 C6orf52Q5T4I8 152 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 IL23RQ5VWK5 629 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 CCDC117Q8IWD4 279 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 PGAM4Q8N0Y7 254 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 TEX26Q8N6G2 289 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 LPGAT1Q92604 370 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 KLHL32Q96NJ5 620 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 ERVK-6Q9BXR3 956 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 ADGRE3Q9BY15 652 aa11.47□□□□□ -0.57
ARHGEF1-220ENST00000600274 AKAP10O43572 662 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 URODP06132 367 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 NRG1Q02297 640 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CLCQ05315 142 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 RING1Q06587 406 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CNPY1Q3B7I2 92 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 RARS2Q5T160 578 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 ANKS6Q68DC2 871 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 APCDD1Q8J025 514 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CLYBLQ8N0X4 340 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 STAG3L4Q8TBR4 150 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 IGSF21Q96ID5 467 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 VN1R3Q9BXE9 311 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 TDRD1Q9BXT4 1180 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CACNA2D2Q9NY47 1150 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 CROTQ9UKG9 612 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 ZNF236Q9UL36 1845 aa11.46□□□□□ -0.57
ARHGEF1-220ENST00000600274 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.58
ARHGEF1-220ENST00000600274 ALDOCP09972 364 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms