RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ERVH48-1M5A8F1 160 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 APOL1O14791 398 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 ASMTLO95671 621 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 KRT1P04264 644 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 PIRTP0C851 137 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 CCL4P13236 92 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 CA4P22748 312 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 CDC25BP30305 580 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 HENMT1Q5T8I9 393 aaKnown RBP22.72■■□□□ 1.23
CCDC61-207ENST00000599044 LYSMD3Q7Z3D4 306 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 ZNF761Q86XN6 746 aaPredicted RBP22.72■■□□□ 1.23
CCDC61-207ENST00000599044 ZNF843Q8N446 348 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 TTC9Q92623 222 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 USP7Q93009 1102 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 ZNF830Q96NB3 372 aaPredicted RBP22.72■■□□□ 1.23
CCDC61-207ENST00000599044 AGAP3Q96P47 875 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 FAM83DQ9H4H8 585 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 HAUS2Q9NVX0 235 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 ZNHIT2Q9UHR6 403 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 DNPEPQ9ULA0 475 aa22.72■■□□□ 1.23
CCDC61-207ENST00000599044 IGHV5-10-1A0A0J9YXX1 117 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 C9orf172C9J069 976 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 NVLO15381 856 aaKnown RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 MPSTP25325 297 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 NOP2P46087 812 aaKnown RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 MAPK10P53779 464 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 DYNLT1P63172 113 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 LLGL1Q15334 1064 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 ZNF648Q5T619 568 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 MFSD7Q6UXD7 560 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 CCDC81Q6ZN84 652 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 ZFAND4Q86XD8 727 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 GALNT13Q8IUC8 556 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 RHOT2Q8IXI1 618 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 IMP4Q96G21 291 aaKnown RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 CMKLR1Q99788 373 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 MAK16Q9BXY0 300 aaKnown RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 SEMA4CQ9C0C4 833 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 ARFGAP3Q9NP61 516 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 TMEM9Q9P0T7 183 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 SEPT10Q9P0V9 454 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 SAE1Q9UBE0 346 aaPredicted RBP22.71■■□□□ 1.23
CCDC61-207ENST00000599044 ACSL6Q9UKU0 697 aa22.71■■□□□ 1.23
CCDC61-207ENST00000599044 IGHV1OR21-1A0A087WYE8 117 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 PYGLP06737 847 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 COMTP21964 271 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 CSF2RBP32927 897 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 GPR3P46089 330 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 RHDQ02161 417 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 GSE1Q14687 1217 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 TAF1BQ53T94 588 aaPredicted RBP22.7■■□□□ 1.22
CCDC61-207ENST00000599044 LRRC38Q5VT99 294 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 CHST15Q7LFX5 561 aaPredicted RBP22.7■■□□□ 1.22
CCDC61-207ENST00000599044 RFX6Q8HWS3 928 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 RAVER1Q8IY67 606 aaKnown RBP22.7■■□□□ 1.22
CCDC61-207ENST00000599044 SPATA22Q8NHS9 363 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 SLC37A2Q8TED4 501 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 PMEPA1Q969W9 287 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 TMEM159Q96B96 161 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 TADA1Q96BN2 335 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 CCDC74BQ96LY2 380 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 CCNL2Q96S94 520 aaPredicted RBP22.7■■□□□ 1.22
CCDC61-207ENST00000599044 SHOC2Q9UQ13 582 aa22.7■■□□□ 1.22
CCDC61-207ENST00000599044 AKR1B15C9JRZ8 316 aaPredicted RBP22.69■■□□□ 1.22
CCDC61-207ENST00000599044 TPM1P09493 284 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 BIRC2Q13490 618 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 LY6DQ14210 128 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 PDK1Q15118 436 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 TCEAL1Q15170 157 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 PCSK7Q16549 785 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 NT5DC3Q86UY8 548 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 VSIG1Q86XK7 387 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 SPC24Q8NBT2 197 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 GPR26Q8NDV2 337 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 ADGRE3Q9BY15 652 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 GOLPH3Q9H4A6 298 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 PKD2L2Q9NZM6 624 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 VPS18Q9P253 973 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 TBC1D29Q9UFV1 150 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 TFR2Q9UP52 801 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 KCNK6Q9Y257 313 aa22.69■■□□□ 1.22
CCDC61-207ENST00000599044 MT-CYBP00156 380 aaPredicted RBP22.68■■□□□ 1.22
CCDC61-207ENST00000599044 ARSDP51689 593 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 LIMK2P53671 638 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 ADCY2Q08462 1091 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 LRP8Q14114 963 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 ALS2CLQ60I27 953 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 RHOT1Q8IXI2 618 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 SFRP1Q8N474 314 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 CCHCR1Q8TD31 782 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 SLC25A51Q9H1U9 297 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 ZFYVE1Q9HBF4 777 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 KCNK4Q9NYG8 393 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 ATXN10Q9UBB4 475 aa22.68■■□□□ 1.22
CCDC61-207ENST00000599044 FGF3P11487 239 aaPredicted RBP22.67■■□□□ 1.22
CCDC61-207ENST00000599044 ACP5P13686 325 aa22.67■■□□□ 1.22
CCDC61-207ENST00000599044 PECAM1P16284 738 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms