RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GRIA1P42261 906 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 C1orf61Q13536 156 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 PTPRCAPQ14761 206 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 TPSAB1Q15661 275 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 FAM151BQ6UXP7 276 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 KANSL1Q7Z3B3 1105 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 EID2Q8N6I1 236 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 COX14Q96I36 57 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 TBATAQ96M53 351 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 LRRC61Q9BV99 259 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 CASS4Q9NQ75 786 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 PCOLCE2Q9UKZ9 415 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 TMEM98Q9Y2Y6 226 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 DGKBQ9Y6T7 804 aa19.52■□□□□ 0.72
SHKBP1-214ENST00000597396 EPG5Q9HCE0 2579 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 SLC25A14O95258 325 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CEACAM5P06731 702 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 ALPPL2P10696 532 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 HADHAP40939 763 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 POLD2P49005 469 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 ZNF140P52738 457 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 TMPRSS15P98073 1019 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CDK16Q00536 496 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 TCEA2Q15560 299 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CHRNA6Q15825 494 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CERCAMQ5T4B2 595 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 PHYKPLQ8IUZ5 450 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 SLC25A45Q8N413 288 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 FSTL5Q8N475 847 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 OR13C4Q8NGS5 318 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 GLYATL1Q969I3 302 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CARS2Q9HA77 564 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 IL26Q9NPH9 171 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 ASIC3Q9UHC3 531 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 PCYOX1Q9UHG3 505 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 FKBPLQ9UIM3 349 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CNOT6Q9ULM6 557 aaKnown RBP19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 DOLKQ9UPQ8 538 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 SLC17A4Q9Y2C5 497 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 NEU2Q9Y3R4 380 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 CSNK1G3Q9Y6M4 447 aa19.51■□□□□ 0.71
SHKBP1-214ENST00000597396 AP3B1O00203 1094 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 LDB2O43679 373 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 KCNK5O95279 499 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 CEACAM1P13688 526 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 GNPDA1P46926 289 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 SARNPP82979 210 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 LAMB3Q13751 1172 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 ITGA9Q13797 1035 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 ELOCQ15369 112 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 ATP13A5Q4VNC0 1218 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 KCTD16Q68DU8 428 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 MARK2Q7KZI7 788 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 GDAP1Q8TB36 358 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 STYXQ8WUJ0 223 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 ZNF592Q92610 1267 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 SLCO2A1Q92959 643 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 CDC6Q99741 560 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 ARFGAP3Q9NP61 516 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 FTSJ1Q9UET6 329 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 APPL1Q9UKG1 709 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 SUFUQ9UMX1 484 aa19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 OAS3Q9Y6K5 1087 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-214ENST00000597396 CCDC78A2IDD5 438 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 HEATR9A2RTY3 570 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 KIF2AO00139 706 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 PRAMEF1O95521 474 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 IVLP07476 585 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 ANXA6P08133 673 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 SESN2P58004 480 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 PTK6Q13882 451 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 KCNJ11Q14654 390 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 CCDC38Q502W7 563 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 GKN2Q86XP6 184 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 OR4C6Q8NH72 309 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 DTX3LQ8TDB6 740 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 DNAJC1Q96KC8 554 aaKnown RBP19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 VPS35Q96QK1 796 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 C19orf43Q9BQ61 176 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 DUSP23Q9BVJ7 150 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 NLE1Q9NVX2 485 aaPredicted RBP19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 NLGN3Q9NZ94 848 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 VPS18Q9P253 973 aa19.49■□□□□ 0.71
SHKBP1-214ENST00000597396 CACNA1BQ00975 2339 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 TCRBV7S3A2A0A539 114 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 GIPC1O14908 333 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A9O60656 530 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 CBFA2T3O75081 653 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 LDOC1O95751 146 aaPredicted RBP19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 TUBB4AP04350 444 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A6P19224 532 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A1P22309 533 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A4P22310 534 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 ADRA1DP25100 572 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A3P35503 534 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 UGT1A5P35504 534 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 ADCY8P40145 1251 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 PTGIRP43119 386 aa19.48■□□□□ 0.71
SHKBP1-214ENST00000597396 MAGEA6P43360 314 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms