RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 KRT14P02533 472 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 CEACAM5P06731 702 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 HOXC4P09017 264 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 LPOP22079 712 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 SPAM1P38567 509 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 FOXC1Q12948 553 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 POU6F1Q14863 301 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 ELOCQ15369 112 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 TAF1AQ15573 450 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 HENMT1Q5T8I9 393 aaKnown RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 KCTD11Q693B1 232 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 DENND5AQ6IQ26 1287 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 TTC27Q6P3X3 843 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 DRICH1Q6PGQ1 229 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 CCDC137Q6PK04 289 aaKnown RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 FAM151BQ6UXP7 276 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 ADAMTSL4Q6UY14 1074 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 TAF8Q7Z7C8 310 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 NLRP8Q86W28 1048 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 TRAM1L1Q8N609 369 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 OR4K2Q8NGD2 314 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 ACTRT1Q8TDG2 376 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 FRMD8Q9BZ67 464 aaPredicted RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 CLPBQ9H078 707 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 TMEM168Q9H0V1 697 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
LIG1-211ENST00000596457 IL17CQ9P0M4 197 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 SIRPGQ9P1W8 387 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 GULP1Q9UBP9 304 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 ZNHIT2Q9UHR6 403 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 SUFUQ9UMX1 484 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 PRKAB1Q9Y478 270 aa11.01□□□□□ -0.65
LIG1-211ENST00000596457 OAS3Q9Y6K5 1087 aaKnown RBP11.01□□□□□ -0.65
LIG1-211ENST00000596457 CCL22O00626 93 aa11□□□□□ -0.65
LIG1-211ENST00000596457 TNFRSF10CO14798 259 aa11□□□□□ -0.65
LIG1-211ENST00000596457 YY2O15391 372 aa11□□□□□ -0.65
LIG1-211ENST00000596457 TNFSF14O43557 240 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A9O60656 530 aa11□□□□□ -0.65
LIG1-211ENST00000596457 PHF2O75151 1096 aa11□□□□□ -0.65
LIG1-211ENST00000596457 MTX2O75431 263 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CRTAMO95727 393 aa11□□□□□ -0.65
LIG1-211ENST00000596457 GAS8O95995 478 aa11□□□□□ -0.65
LIG1-211ENST00000596457 FUCA1P04066 466 aa11□□□□□ -0.65
LIG1-211ENST00000596457 APRTP07741 180 aa11□□□□□ -0.65
LIG1-211ENST00000596457 FTH1P19P0C7X4 201 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A6P19224 532 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A1P22309 533 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A4P22310 534 aa11□□□□□ -0.65
LIG1-211ENST00000596457 TEAD1P28347 426 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CASQ1P31415 396 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A3P35503 534 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A5P35504 534 aa11□□□□□ -0.65
LIG1-211ENST00000596457 HMGCLP35914 325 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CHRNA6Q15825 494 aa11□□□□□ -0.65
LIG1-211ENST00000596457 LINC00523Q86TU6 105 aa11□□□□□ -0.65
LIG1-211ENST00000596457 SLCO6A1Q86UG4 719 aa11□□□□□ -0.65
LIG1-211ENST00000596457 GKN2Q86XP6 184 aa11□□□□□ -0.65
LIG1-211ENST00000596457 RAVER1Q8IY67 606 aaKnown RBP11□□□□□ -0.65
LIG1-211ENST00000596457 FSTL5Q8N475 847 aaPredicted RBP11□□□□□ -0.65
LIG1-211ENST00000596457 OR13C4Q8NGS5 318 aa11□□□□□ -0.65
LIG1-211ENST00000596457 OR4C6Q8NH72 309 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CCL4L1Q8NHW4 92 aa11□□□□□ -0.65
LIG1-211ENST00000596457 BAHD1Q8TBE0 780 aaPredicted RBP11□□□□□ -0.65
LIG1-211ENST00000596457 BRSK1Q8TDC3 778 aa11□□□□□ -0.65
LIG1-211ENST00000596457 SCG3Q8WXD2 468 aaKnown RBP11□□□□□ -0.65
LIG1-211ENST00000596457 APOLD1Q96LR9 279 aa11□□□□□ -0.65
LIG1-211ENST00000596457 ZSCAN5AQ9BUG6 496 aa11□□□□□ -0.65
LIG1-211ENST00000596457 OR2AG1Q9H205 316 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A7Q9HAW7 530 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A10Q9HAW8 530 aa11□□□□□ -0.65
LIG1-211ENST00000596457 UGT1A8Q9HAW9 530 aa11□□□□□ -0.65
LIG1-211ENST00000596457 NLGN3Q9NZ94 848 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CNOT6Q9ULM6 557 aaKnown RBP11□□□□□ -0.65
LIG1-211ENST00000596457 APOBEC2Q9Y235 224 aaKnown RBP11□□□□□ -0.65
LIG1-211ENST00000596457 PLEKHM1Q9Y4G2 1056 aa11□□□□□ -0.65
LIG1-211ENST00000596457 SAR1BQ9Y6B6 198 aa11□□□□□ -0.65
LIG1-211ENST00000596457 CSNK1G3Q9Y6M4 447 aa11□□□□□ -0.65
LIG1-211ENST00000596457 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 TMEM8BA6NDV4 472 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CES2O00748 559 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 GPR39O43194 453 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 GIMD1P0DJR0 217 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 AK4P27144 223 aaPredicted RBP10.99□□□□□ -0.65
LIG1-211ENST00000596457 GRIA1P42261 906 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 PAFAH1B1P43034 410 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 DCDC1P59894 354 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CDH17Q12864 832 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 GPS1Q13098 491 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 SEMA5AQ13591 1074 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 ATP13A5Q4VNC0 1218 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CCDC38Q502W7 563 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CERCAMQ5T4B2 595 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 PAPD7Q5XG87 772 aaKnown RBP10.99□□□□□ -0.65
LIG1-211ENST00000596457 C4orf22Q6V702 233 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 SYT10Q6XYQ8 523 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 MICALCLQ6ZW33 695 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CHST15Q7LFX5 561 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms