RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CYBBP04839 570 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 ATXN1LP0C7T5 689 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 CDH1P12830 882 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 FOXA1P55317 472 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ANKRD26P1Q6NSI1 321 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 RIMKLAQ8IXN7 391 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZNF683Q8IZ20 524 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 OR52K2Q8NGK3 314 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 STAG3L4Q8TBR4 150 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SNRNP27Q8WVK2 155 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 CASP10Q92851 521 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 AARSD1Q9BTE6 412 aaKnown RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 DERL2Q9GZP9 239 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 GPN2Q9H9Y4 310 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 MAGEE1Q9HCI5 957 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 TMEM248Q9NWD8 314 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 IFT80Q9P2H3 777 aaPredicted RBP13.18□□□□□ -0.3
VRK3-209ENST00000594948 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
VRK3-209ENST00000594948 A0A1W2PPW3 197 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 FAM234BA2RU67 622 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 ASPDHA6ND91 283 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 SYCE1LA8MT33 242 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 CD3EAPO15446 510 aaKnown RBP13.17□□□□□ -0.3
VRK3-209ENST00000594948 RPP40O75818 363 aaKnown RBP13.17□□□□□ -0.3
VRK3-209ENST00000594948 SIX3O95343 332 aaPredicted RBP13.17□□□□□ -0.3
VRK3-209ENST00000594948 FGF1P05230 155 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
VRK3-209ENST00000594948 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 CCNA2P20248 432 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 HOXC8P31273 242 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 GJA5P36382 358 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 NFATC3Q12968 1075 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 UPP1Q16831 310 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 PFKFB4Q16877 469 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 TYSND1Q2T9J0 566 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 SLC44A4Q53GD3 710 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 BROXQ5VW32 411 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 TXNDC11Q6PKC3 985 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 AADATQ8N5Z0 425 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 DPP10Q8N608 796 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
VRK3-209ENST00000594948 CHPT1Q8WUD6 406 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 NRBF2Q96F24 287 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 TMEM209Q96SK2 561 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 GAD1Q99259 594 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 GIMAP2Q9UG22 337 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 SEPT3Q9UH03 358 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
VRK3-209ENST00000594948 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CCDC154A6NI56 674 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 IFRD1O00458 451 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 TNFRSF10BO14763 440 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 KLK8O60259 260 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CHEK2O96017 543 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 EPOP01588 193 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 LINC00032P0C843 101 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 UROSP10746 265 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 MTHFD1P11586 935 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 ALDH3A2P51648 485 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ERVK-8P63133 956 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 DSC2Q02487 901 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 KCNC4Q03721 635 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 EPS8Q12929 822 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SCD5Q86SK9 330 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 ARRDC2Q8TBH0 407 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 EXT2Q93063 718 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ACDQ96AP0 544 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ISG20Q96AZ6 181 aaKnown RBP13.16□□□□□ -0.3
VRK3-209ENST00000594948 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 ZYG11BQ9C0D3 744 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 SP110Q9HB58 689 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
VRK3-209ENST00000594948 TLR6Q9Y2C9 796 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms