RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 TRNAU1APQ9NX07 287 aaKnown RBP21.74■■□□□ 1.07
HOMER3-206ENST00000594439 VPS18Q9P253 973 aa21.74■■□□□ 1.07
HOMER3-206ENST00000594439 TMPRSS11EQ9UL52 423 aa21.74■■□□□ 1.07
HOMER3-206ENST00000594439 SNX12Q9UMY4 172 aa21.74■■□□□ 1.07
HOMER3-206ENST00000594439 DOLKQ9UPQ8 538 aa21.74■■□□□ 1.07
HOMER3-206ENST00000594439 ARL5AQ9Y689 179 aa21.74■■□□□ 1.07
HOMER3-206ENST00000594439 ARHGEF17Q96PE2 2063 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ASMTLO95671 621 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ZSCAN5DPP0CG00 497 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 SPINK2P20155 84 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 RPL22P35268 128 aaKnown RBP21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ACTN2P35609 894 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 SPAM1P38567 509 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ILKQ13418 452 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 PTPRCAPQ14761 206 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ZDHHC20Q5W0Z9 365 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 MARK2Q7KZI7 788 aaKnown RBP21.73■■□□□ 1.07
HOMER3-206ENST00000594439 TAF8Q7Z7C8 310 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 NRROSQ86YC3 692 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 SLC35F3Q8IY50 421 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 CCDC89Q8N998 374 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 SCG3Q8WXD2 468 aaKnown RBP21.73■■□□□ 1.07
HOMER3-206ENST00000594439 GLYATL1Q969I3 302 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 SMARCAL1Q9NZC9 954 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 PAK5Q9P286 719 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 ANGPTL2Q9UKU9 493 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 PKP3Q9Y446 797 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 KCTD3Q9Y597 815 aa21.73■■□□□ 1.07
HOMER3-206ENST00000594439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
HOMER3-206ENST00000594439 C2orf81A6NN90 581 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ERI2A8K979 691 aaKnown RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 GAPDHSO14556 408 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 STX7O15400 261 aaKnown RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 DNAJC6O75061 913 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 PPFIA2O75334 1257 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 LPOP22079 712 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ADCY8P40145 1251 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 DUSP3P51452 185 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 SEMA5AQ13591 1074 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 PYCR3Q53H96 274 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 DHRS13Q6UX07 377 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 VPS35Q96QK1 796 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 OR2M4Q96R27 311 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 SCNM1Q9BWG6 230 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ARFGAP3Q9NP61 516 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 RAB6BQ9NRW1 208 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 NCKIPSDQ9NZQ3 722 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 GPR34Q9UPC5 381 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 PLEKHM1Q9Y4G2 1056 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 PCYT1BQ9Y5K3 369 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ST14Q9Y5Y6 855 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 PLXNB3Q9ULL4 1909 aa21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ZFC3H1O60293 1989 aaKnown RBP21.72■■□□□ 1.07
HOMER3-206ENST00000594439 ASXL3Q9C0F0 2248 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 PGRMC1O00264 195 aaKnown RBP21.71■■□□□ 1.07
HOMER3-206ENST00000594439 CES2O00748 559 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 SUN1O94901 812 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 SLC25A14O95258 325 aaPredicted RBP21.71■■□□□ 1.07
HOMER3-206ENST00000594439 CTBSQ01459 385 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 NR0B2Q15466 257 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 CHRNA6Q15825 494 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 ATP13A5Q4VNC0 1218 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 ZNF648Q5T619 568 aaPredicted RBP21.71■■□□□ 1.07
HOMER3-206ENST00000594439 OR4K2Q8NGD2 314 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 ACTRT1Q8TDG2 376 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 GLMNQ92990 594 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 GSDMCQ9BYG8 508 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 TRIM39Q9HCM9 518 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 EVA1BQ9NVM1 165 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 ATXN10Q9UBB4 475 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 KLK13Q9UKR3 277 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 GPSM3Q9Y4H4 160 aa21.71■■□□□ 1.07
HOMER3-206ENST00000594439 GLYATL1P3A0A0U1RQE8 302 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 EME2A4GXA9 379 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 FAM221BA6H8Z2 402 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 LDB2O43679 373 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 CRTAMO95727 393 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 CDK4P11802 303 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 TPH1P17752 444 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 AK4P27144 223 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 ZNF140P52738 457 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 GNG11P61952 73 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 ILF3Q12906 894 aaKnown RBP eCLIP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 SMAD1Q15797 465 aaKnown RBP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 TTC27Q6P3X3 843 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 GUSBP11Q6P575 273 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 OGFOD3Q6PK18 319 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 FAM151BQ6UXP7 276 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 GSTA5Q7RTV2 222 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 TMPRSS7Q7RTY8 843 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 ADGRG6Q86SQ4 1221 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 LINC00523Q86TU6 105 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 GALNT13Q8IUC8 556 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 PHYKPLQ8IUZ5 450 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 ARL10Q8N8L6 244 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 KYQ8NBH2 561 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 FAM46DQ8NEK8 389 aa21.7■■□□□ 1.06
HOMER3-206ENST00000594439 NAP1L3Q99457 506 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-206ENST00000594439 AP1M1Q9BXS5 423 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms