RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NKX2-8O15522 239 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 ARSEP51690 589 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 NIPAL4Q0D2K0 466 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 NFATC2Q13469 925 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 FILIP1LQ4L180 1135 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 TDRD12Q587J7 1177 aaKnown RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 TIPARPQ7Z3E1 657 aaKnown RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 CPNE8Q86YQ8 564 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 LPCAT1Q8NF37 534 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 SLC45A3Q96JT2 553 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 TEFMQ96QE5 360 aaKnown RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 NUP85Q9BW27 656 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 SARS2Q9NP81 518 aaKnown RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 RBM22Q9NW64 420 aaKnown RBP eCLIP16.21■□□□□ 0.19
LIG1-205ENST00000593425 VPS18Q9P253 973 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 RCOR3Q9P2K3 495 aaPredicted RBP16.21■□□□□ 0.19
LIG1-205ENST00000593425 IP6K2Q9UHH9 426 aa16.21■□□□□ 0.19
LIG1-205ENST00000593425 A6NCN8 305 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 MATN3O15232 486 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 HLA-DQB2P05538 268 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 ACP5P13686 325 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 GJC1P36383 396 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 MAPK9P45984 424 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 CCR10P46092 362 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 ZNF165P49910 485 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 MC2RQ01718 297 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 DPYSL3Q14195 570 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 PAFAH1B3Q15102 231 aaKnown RBP16.2■□□□□ 0.18
LIG1-205ENST00000593425 SKIDA1Q1XH10 827 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 ATP13A4Q4VNC1 1196 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 COLEC12Q5KU26 742 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 IYDQ6PHW0 289 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 WDR74Q6RFH5 385 aaPredicted RBP16.2■□□□□ 0.18
LIG1-205ENST00000593425 LRRC49Q8IUZ0 686 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 UNC5BQ8IZJ1 945 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 NLGN4XQ8N0W4 816 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 NLGN4YQ8NFZ3 816 aaPredicted RBP16.2■□□□□ 0.18
LIG1-205ENST00000593425 NCSTNQ92542 709 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 LYSMD1Q96S90 227 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 NAT10Q9H0A0 1025 aaKnown RBP16.2■□□□□ 0.18
LIG1-205ENST00000593425 EPN3Q9H201 632 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 GPN2Q9H9Y4 310 aaPredicted RBP16.2■□□□□ 0.18
LIG1-205ENST00000593425 TMEM63CQ9P1W3 806 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 KLHL3Q9UH77 587 aa16.2■□□□□ 0.18
LIG1-205ENST00000593425 C1orf232A0A0U1RR37 186 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 PRKAR1AP10644 381 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 SPINT3P49223 89 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
LIG1-205ENST00000593425 HENMT1Q5T8I9 393 aaKnown RBP16.19■□□□□ 0.18
LIG1-205ENST00000593425 TIGD7Q6NT04 549 aaPredicted RBP16.19■□□□□ 0.18
LIG1-205ENST00000593425 CATSPER2Q96P56 530 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 TBC1D10AQ9BXI6 508 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 PCDH9Q9HC56 1237 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 TUBD1Q9UJT1 453 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
LIG1-205ENST00000593425 UBR5O95071 2799 aaPredicted RBP16.19■□□□□ 0.18
LIG1-205ENST00000593425 SMTNL1A8MU46 457 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CAPN5O15484 640 aaPredicted RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 SNX2O60749 519 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 STK17BO94768 372 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CYP1A2P05177 515 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 F3P13726 295 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CES1P23141 567 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CCNCP24863 283 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 MAP4P27816 1152 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 OAS2P29728 719 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 SSR1P43307 286 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 EPHA4P54764 986 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 SRSF1Q07955 248 aaKnown RBP eCLIP16.18■□□□□ 0.188e-7■■■■□ 21.3
LIG1-205ENST00000593425 CDC20Q12834 499 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 NR1I3Q14994 352 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 QPCTQ16769 361 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 FIGNQ5HY92 759 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 FAM182AQ5T1J6 154 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 CEACAM20Q6UY09 585 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 LYSMD3Q7Z3D4 306 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 SLC9B2Q86UD5 537 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 RAVER1Q8IY67 606 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 RNF31Q96EP0 1072 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 TSGA13Q96PP4 275 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 HERPUD2Q9BSE4 406 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 STN1Q9H668 368 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 ARFGAP3Q9NP61 516 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 FBXO8Q9NRD0 319 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 AMACRQ9UHK6 382 aa16.18■□□□□ 0.18
LIG1-205ENST00000593425 TMEM184BQ9Y519 407 aaPredicted RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 TLN1Q9Y490 2541 aaKnown RBP16.18■□□□□ 0.18
LIG1-205ENST00000593425 A0A087X0T9 212 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 DLGAP3O95886 979 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 MBD3O95983 291 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 MMP2P08253 660 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 FAM228BP0C875 321 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 CA4P22748 312 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 GFERP55789 205 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 RPL26P61254 145 aaKnown RBP16.17■□□□□ 0.18
LIG1-205ENST00000593425 GBE1Q04446 702 aa16.17■□□□□ 0.18
LIG1-205ENST00000593425 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms