RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
H3F3B-213ENST00000593254 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 ST14Q9Y5Y6 855 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
H3F3B-213ENST00000593254 ANKRD66B4E2M5 251 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 SPOPO43791 374 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 NUDT21O43809 227 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 LCA5LO95447 670 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 CLDN7O95471 211 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 RPLP0P05388 317 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 COMTP21964 271 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 GNPDA1P46926 289 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 POLD2P49005 469 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 TLE1Q04724 770 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 AP1B1Q10567 949 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 EIF3IQ13347 325 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 TGIF1Q15583 401 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 TAZQ16635 292 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 QPCTQ16769 361 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 MFSD7Q6UXD7 560 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 SPRED1Q7Z699 444 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 CCNJLQ8IV13 435 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 RNF25Q96BH1 459 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 COX14Q96I36 57 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 BRD8Q9H0E9 1235 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 SUDS3Q9H7L9 328 aaPredicted RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
H3F3B-213ENST00000593254 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 ICE1Q9Y2F5 2266 aa13.12□□□□□ -0.31
H3F3B-213ENST00000593254 C1orf232A0A0U1RR37 186 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CLEC18AA5D8T8 446 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 PSTPIP1O43586 416 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 FGF1P05230 155 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 PYGBP11216 843 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 AK4P27144 223 aaPredicted RBP13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CCKBRP32239 447 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 UGT1A5P35504 534 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 ADCY8P40145 1251 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CDKN2BP42772 138 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 MAGEA1P43355 309 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CTBSQ01459 385 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 TBR1Q16650 682 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 ODF2Q5BJF6 829 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 TRIM74Q86UV6 250 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 RFX6Q8HWS3 928 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 EXD1Q8NHP7 514 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 ZDHHC1Q8WTX9 485 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 IMP4Q96G21 291 aaKnown RBP13.11□□□□□ -0.31
H3F3B-213ENST00000593254 TRIB3Q96RU7 358 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 WDR24Q96S15 920 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 MLPHQ9BV36 600 aaPredicted RBP13.11□□□□□ -0.31
H3F3B-213ENST00000593254 ADGRE3Q9BY15 652 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 CDH19Q9H159 772 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 LRIT1Q9P2V4 623 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
H3F3B-213ENST00000593254 NVLO15381 856 aaKnown RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 LIPCP11150 499 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 TNNT1P13805 278 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 SPINT3P49223 89 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 MAZP56270 477 aaKnown RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 DYNLT1P63172 113 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 B4GALNT1Q00973 533 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 TFDP2Q14188 446 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 NR1D2Q14995 579 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 SLC14A2Q15849 920 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 PYCR3Q53H96 274 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 FAM182AQ5T1J6 154 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 RAB11FIP2Q7L804 512 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 ZNF438Q7Z4V0 828 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 NT5DC3Q86UY8 548 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 NAGSQ8N159 534 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 CCHCR1Q8TD31 782 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 TMEM74Q96NL1 305 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 OR2M4Q96R27 311 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 GOLPH3Q9H4A6 298 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms