RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PCSK2P16519 638 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 MMP8P22894 467 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 RAB25P57735 213 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 GNA12Q03113 381 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 ZSWIM7Q19AV6 140 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 FAM151BQ6UXP7 276 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 RBM44Q6ZP01 1051 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 RCN3Q96D15 328 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 SNX15Q9NRS6 342 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 ELOVL2Q9NXB9 296 aa13.27□□□□□ -0.28
SMARCA4-216ENST00000591545 PRMT3O60678 531 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 PEX11AO75192 247 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 CDK14O94921 469 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 HGFP14210 728 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 DDX6P26196 483 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 RCVRNP35243 200 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 COPZ1P61923 177 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 OLR1P78380 273 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 FAM180AQ6UWF9 173 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 PACS1Q6VY07 963 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 IZUMO1Q8IYV9 350 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 PQLC1Q8N2U9 271 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 COL26A1Q96A83 441 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 REXO5Q96IC2 774 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 ITCHQ96J02 903 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 TLR9Q9NR96 1032 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 VPS4AQ9UN37 437 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 POLR1DQ9Y2S0 133 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 MYBPHLA2RUH7 354 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 AREL1O15033 823 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 EPHB6O15197 1021 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 OR6A2O95222 327 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 BPGMP07738 259 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 ENPEPQ07075 957 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 DMPKQ09013 629 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 AP5B1Q2VPB7 878 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 ANXA8L1Q5VT79 327 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 AGMOQ6ZNB7 445 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 GALNT13Q8IUC8 556 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 JOSD2Q8TAC2 188 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 TMEM109Q9BVC6 243 aa13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 TRMT61BQ9BVS5 477 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-216ENST00000591545 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CCT3P49368 545 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TAF8Q7Z7C8 310 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 ARMC8Q8IUR7 673 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 POC5Q8NA72 575 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 KCTD4Q8WVF5 259 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 FAM84AQ96KN4 292 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CPXM1Q96SM3 734 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 RPRD1BQ9NQG5 326 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TGFBR2P37173 567 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 UGT2B15P54855 530 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 AP1S1P61966 158 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CNSTQ6PJW8 725 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 FAM220AQ7Z4H9 259 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SPATA19Q7Z5L4 167 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC22A17Q8WUG5 538 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 C5orf60A6NFR6 353 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 ATG13O75143 517 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 PGM3O95394 542 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CST1P01037 141 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TPSB2P20231 275 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 IL12AP29459 219 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 AKT2P31751 481 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 PTPN9P43378 593 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CDK9P50750 372 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 MAPK10P53779 464 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CYP4F8P98187 520 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 UBAP2LQ14157 1087 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 GPR180Q86V85 440 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 KBTBD2Q8IY47 623 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CLIP3Q96DZ5 547 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 KREMEN1Q96MU8 473 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC9A7Q96T83 725 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SSU72Q9NP77 194 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 FBXO5Q9UKT4 447 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC9A8Q9Y2E8 581 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 HAT1O14929 419 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 MGRN1O60291 552 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 VITQ6UXI7 678 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 DNAJB7Q7Z6W7 309 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 HDAC10Q969S8 669 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TIMMDC1Q9NPL8 285 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 PCDHGC3Q9UN70 934 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms