RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ZNF185O15231 689 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 HTRA2O43464 458 aaPredicted RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 ITGA2BP08514 1039 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 PAFAH1B1P43034 410 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 RHDQ02161 417 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 EIF3IQ13347 325 aaKnown RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 ITPRIPL1Q6GPH6 555 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 PCSK4Q6UW60 755 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 ZNF567Q8N184 647 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 PRELID2Q8N945 189 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 TADA1Q96BN2 335 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 IMP4Q96G21 291 aaKnown RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 C16orf45Q96MC5 204 aaPredicted RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 PPP1R2P1Q96PQ5 205 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 FCRL5Q96RD9 977 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 GFM1Q96RP9 751 aaKnown RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 CPNE5Q9HCH3 593 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 KLHL8Q9P2G9 620 aaPredicted RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 ZNF148Q9UQR1 794 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 GOLGA6L10A0A0M3HER8 536 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 A0A1W2PQM1 296 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 TMX2-CTNND1H3BSU7 103 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 TNFSF15O95150 251 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 CA4P22748 312 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 CCL7P80098 99 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 DSC2Q02487 901 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 VAC14Q08AM6 782 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 NIPAL4Q0D2K0 466 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 ANKRD20A2Q5SQ80 823 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 ANKRD20A1Q5TYW2 823 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 ANKRD20A3Q5VUR7 823 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 FOXR1Q6PIV2 292 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 OGFOD3Q6PK18 319 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 C4orf22Q6V702 233 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 B3GNT8Q7Z7M8 397 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 COQ10AQ96MF6 247 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 SPATA13Q96N96 652 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 TMEM121Q9BTD3 319 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 WDR26Q9H7D7 661 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 C10orf88Q9H8K7 445 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 MRPL40Q9NQ50 206 aaKnown RBP17.89■□□□□ 0.45
VAT1-208ENST00000590924 KCTD5Q9NXV2 234 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 B4GALT6Q9UBX8 382 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
VAT1-208ENST00000590924 APPL1Q9UKG1 709 aa17.89■□□□□ 0.45
VAT1-208ENST00000590924 PDE2AO00408 941 aaPredicted RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 PLD2O14939 933 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 NOBOXO60393 691 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 RPLP0P05388 317 aaKnown RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 MMP2P08253 660 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 PNLIPP16233 465 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 GLB1P16278 677 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 NFKBIAP25963 317 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 CCKBRP32239 447 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 CD68P34810 354 aaPredicted RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 RPL26P61254 145 aaKnown RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 ACOX1Q15067 660 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 CNGA3Q16281 694 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 P3H1Q32P28 736 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 CERCAMQ5T4B2 595 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 ARHGAP40Q5TG30 622 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 PNCKQ6P2M8 343 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 TAF8Q7Z7C8 310 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 PELI3Q8N2H9 469 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 FAM71DQ8N9W8 422 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 MAGOHBQ96A72 148 aaKnown RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 NUS1Q96E22 293 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 WBP1Q96G27 269 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 TMEM74Q96NL1 305 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 LGR4Q9BXB1 951 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 CEP41Q9BYV8 373 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 STRADBQ9C0K7 418 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 TMEM168Q9H0V1 697 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 LRRN3Q9H3W5 708 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 RPL26L1Q9UNX3 145 aaKnown RBP17.88■□□□□ 0.45
VAT1-208ENST00000590924 TTLL3Q9Y4R7 772 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 PCDHGC4Q9Y5F7 938 aa17.88■□□□□ 0.45
VAT1-208ENST00000590924 PRSS38A1L453 326 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
VAT1-208ENST00000590924 A8MX80 341 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 FZD6O60353 706 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
VAT1-208ENST00000590924 CPP00450 1065 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 MYCLP1P12525 358 aaPredicted RBP17.87■□□□□ 0.45
VAT1-208ENST00000590924 VIPR1P32241 457 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 INHBCP55103 352 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 SNX1Q13596 522 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 TUBB2AQ13885 445 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 PARP6Q2NL67 630 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 C14orf28Q4W4Y0 310 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 RAB11FIP2Q7L804 512 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 CCNJLQ8IV13 435 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 NDUFAF2Q8N183 169 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 FAM46DQ8NEK8 389 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 TUBB2BQ9BVA1 445 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 AP1M1Q9BXS5 423 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 FOXP3Q9BZS1 431 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 GBA3Q9H227 469 aa17.87■□□□□ 0.45
VAT1-208ENST00000590924 EPB41L5Q9HCM4 733 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms