RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 IL17CQ9P0M4 197 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 NCKAP1Q9Y2A7 1128 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.54■□□□□ 0.24
GCDH-213ENST00000590627 ARL5AQ9Y689 179 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 LAMA5O15230 3695 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 CABIN1Q9Y6J0 2220 aa16.54■□□□□ 0.24
GCDH-213ENST00000590627 PLXNB3Q9ULL4 1909 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 ZCWPW2A0A1B0GU75 182 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 TAF4O00268 1085 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 PLRG1O43660 514 aaKnown RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 SPAG6O75602 509 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 CLDN7O95471 211 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 NMBRP28336 390 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 ARHGEF7Q14155 803 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 SUZ12Q15022 739 aaKnown RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 TEAD4Q15561 434 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 CNGA3Q16281 694 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 KYNUQ16719 465 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 SPANXN3Q5MJ09 141 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 BEND6Q5SZJ8 279 aaPredicted RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 LIPIQ6XZB0 460 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 UNC5AQ6ZN44 842 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 SLCO6A1Q86UG4 719 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 PALM2Q8IXS6 379 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 GANCQ8TET4 914 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 MFSD3Q96ES6 412 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 ZNF778Q96MU6 729 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 FCRL3Q96P31 734 aaPredicted RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 CDC6Q99741 560 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 C6orf106Q9H6K1 298 aaPredicted RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 NLE1Q9NVX2 485 aaPredicted RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 LHX6Q9UPM6 363 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 FNDC3AQ9Y2H6 1198 aaKnown RBP16.53■□□□□ 0.24
GCDH-213ENST00000590627 KCTD3Q9Y597 815 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 RPS6KL1Q9Y6S9 549 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 FAM169AQ9Y6X4 670 aa16.53■□□□□ 0.24
GCDH-213ENST00000590627 PTPRBP23467 1997 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 A0A1B0GVT2 93 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 RGSL1A5PLK6 1076 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 STX7O15400 261 aaKnown RBP16.52■□□□□ 0.24
GCDH-213ENST00000590627 SEMA4FO95754 770 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 ADPRHP54922 357 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 GPX6P59796 221 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 SEMG2Q02383 582 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 CRYMQ14894 314 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 ZDHHC20Q5W0Z9 365 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.24
GCDH-213ENST00000590627 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 OR13J1Q8NGT2 312 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 RHBDD1Q8TEB9 315 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 SNX19Q92543 992 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 CFAP36Q96G28 342 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 TRIM56Q9BRZ2 755 aaKnown RBP16.52■□□□□ 0.24
GCDH-213ENST00000590627 FUT8Q9BYC5 575 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 EPB41L4BQ9H329 900 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 PREBQ9HCU5 417 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 MOCS1Q9NZB8 636 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 NFKBIL1Q9UBC1 381 aaPredicted RBP16.52■□□□□ 0.24
GCDH-213ENST00000590627 GGT7Q9UJ14 662 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 ITM2BQ9Y287 266 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 PKP3Q9Y446 797 aa16.52■□□□□ 0.24
GCDH-213ENST00000590627 BAHCC1Q9P281 2608 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 A0A0U1RQS6 177 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 A8MX80 341 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 C10orf142B7Z368 130 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 H7C0S8 307 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 NEMP1O14524 444 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 DKK1O94907 266 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 ABHD2P08910 425 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 C1SP09871 688 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 CD27P26842 260 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 HADHAP40939 763 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 ARCN1P48444 511 aaKnown RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 SPINT3P49223 89 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 LIG3P49916 1009 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 KIF19Q2TAC6 998 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 KIAA0930Q6ICG6 404 aaPredicted RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 ZNF449Q6P9G9 518 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 CES3Q6UWW8 571 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 C3orf62Q6ZUJ4 267 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 TECPR1Q7Z6L1 1165 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 NRSN1Q8IZ57 195 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
GCDH-213ENST00000590627 OR4K2Q8NGD2 314 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 GSDMBQ8TAX9 411 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 DTX3LQ8TDB6 740 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 ZNF669Q96BR6 464 aaPredicted RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 BIRC7Q96CA5 298 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 SGSM3Q96HU1 749 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 DNAJC1Q96KC8 554 aaKnown RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 COQ10AQ96MF6 247 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 CDH19Q9H159 772 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 CCDC86Q9H6F5 360 aaKnown RBP16.51■□□□□ 0.23
GCDH-213ENST00000590627 TM9SF3Q9HD45 589 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 SLC2A6Q9UGQ3 507 aa16.51■□□□□ 0.23
GCDH-213ENST00000590627 ANKRD6Q9Y2G4 727 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms