RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 U3KQV3 271 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 GABRDO14764 452 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 DCLK1O15075 740 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 OR4F21O95013 312 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 RAB42Q8N4Z0 105 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 DUSP12Q9UNI6 340 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 DYRK1BQ9Y463 629 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 RAI2Q9Y5P3 530 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 SORBS2O94875 1100 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 LRATO95237 230 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 TPGS1Q6ZTW0 290 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 DEFB128Q7Z7B8 93 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 OR13C4Q8NGS5 318 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
SMARCA4-215ENST00000590574 A6NHS1 94 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 RPS6KA3P51812 740 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 DUSP4Q13115 394 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 OR7D4Q8NG98 312 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 OR6K2Q8NGY2 324 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 CXorf21Q9HAI6 301 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 EIF2B4Q9UI10 523 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 CAPN14A8MX76 684 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 H3BSA7 217 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 PFKMP08237 780 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 IL4RP24394 825 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 IL10RBQ08334 325 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 CCDC142Q17RM4 750 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 ZNF792Q3KQV3 632 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 BRSK1Q8TDC3 778 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 CCDC162PA2VCL2 907 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 PDLIM1O00151 329 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 CYP4B1P13584 511 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 SERPINA4P29622 427 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 YBEYP58557 167 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 STARD3Q14849 445 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 TXNDC5Q8NBS9 432 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 NT5C1B-RDH14C9J2C7 533 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 J3KR12 359 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 UMPSP11172 480 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 PSMD7P51665 324 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 PERM1Q5SV97 790 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 OSBPL6Q9BZF3 934 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 RERGLQ9H628 205 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 TMCC3Q9ULS5 477 aa17.03■□□□□ 0.32
SMARCA4-215ENST00000590574 IFNA14P01570 189 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 ACSM2AQ08AH3 577 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 SPIDRQ14159 915 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 DEPDC1Q5TB30 811 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 ACSM2BQ68CK6 577 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 SMYD5Q6GMV2 418 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 BORCS5Q969J3 196 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 LINC00854A0A1B0GVQ3 168 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 SOX4Q06945 474 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 SIRPB2Q5JXA9 342 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 ADGRG6Q86SQ4 1221 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 ZNF540Q8NDQ6 660 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 TMEM159Q96B96 161 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 OTUB1Q96FW1 271 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 PHF12Q96QT6 1004 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 PCDHGC4Q9Y5F7 938 aa17.02■□□□□ 0.32
SMARCA4-215ENST00000590574 ZBTB11O95625 1053 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 CES1P23141 567 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 TMEM135Q86UB9 458 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 SLC2A13Q96QE2 648 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 C2orf49Q9BVC5 232 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 MRPL9Q9BYD2 267 aaKnown RBP17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 SNX8Q9Y5X2 465 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 HS3ST4Q9Y661 456 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 CDH15P55291 814 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 TRAF3Q13114 568 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 TTC30BQ8N4P2 665 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 TEKT2Q9UIF3 430 aa17.02■□□□□ 0.31
SMARCA4-215ENST00000590574 OR6C75A6NL08 312 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 ARHGEF9O43307 516 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 CAPGP40121 348 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 PPP1R3AQ16821 1122 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 TAPT1Q6NXT6 567 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 THAP5Q7Z6K1 395 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 ZFAND2BQ8WV99 257 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 FANCEQ9HB96 536 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 PALMDQ9NP74 551 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 ATAD3AQ9NVI7 634 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 ZNF490Q9ULM2 529 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 ZFP37Q9Y6Q3 630 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 NTRK1P04629 796 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 THRBP10828 461 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 DNAJB1P25685 340 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 IRF8Q02556 426 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 UBE3AQ05086 875 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 CNTN1Q12860 1018 aa17.01■□□□□ 0.31
SMARCA4-215ENST00000590574 TMEM214Q6NUQ4 689 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms