RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CLDN7O95471 211 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 KRT1P04264 644 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 MMP2P08253 660 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 LIPCP11150 499 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CD46P15529 392 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 AK4P27144 223 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 CD1CP29017 333 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 ALDH4A1P30038 563 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 SOX11P35716 441 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 POLD2P49005 469 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 HADHBP55084 474 aaKnown RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 MAZP56270 477 aaKnown RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 TFDP2Q14188 446 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 IHHQ14623 411 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 KIR2DS5Q14953 304 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 QPCTQ16769 361 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 TAF1BQ53T94 588 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 ZNF569Q5MCW4 686 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 PHF19Q5T6S3 580 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 HENMT1Q5T8I9 393 aaKnown RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 ARHGAP40Q5TG30 622 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CCDC70Q6NSX1 233 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 DOK6Q6PKX4 331 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 NT5DC3Q86UY8 548 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CPNE8Q86YQ8 564 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 NAGSQ8N159 534 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 SFRP1Q8N474 314 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CNTD1Q8N815 330 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 AGBL5Q8NDL9 886 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 TADA1Q96BN2 335 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 IMP4Q96G21 291 aaKnown RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 OLFM3Q96PB7 478 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 TRIB3Q96RU7 358 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 HERPUD2Q9BSE4 406 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 ZSCAN5AQ9BUG6 496 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 ASPSCR1Q9BZE9 553 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CARD9Q9H257 536 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 SUDS3Q9H7L9 328 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 MAGEE1Q9HCI5 957 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 SPTLC3Q9NUV7 552 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 PISDQ9UG56 409 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 CD84Q9UIB8 345 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 TMEM98Q9Y2Y6 226 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 PCDHGA3Q9Y5H0 932 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 ARID1BQ8NFD5 2236 aaPredicted RBP7.54□□□□□ -1.2
NPC1-208ENST00000590301 LOC400499M0QZD8 3231 aa7.54□□□□□ -1.2
NPC1-208ENST00000590301 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 IGHV1OR21-1A0A087WYE8 117 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 IGHV5-10-1A0A0J9YXX1 117 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 PMS2P1A4D2B8 440 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 B4E171 279 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 INPP4BO15327 924 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SPOPO43791 374 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 DUX1O43812 170 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 DNAJC6O75061 913 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 ASMTLO95671 621 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 NDST3O95803 873 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 EPOP01588 193 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CSTF2P33240 577 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPC1-208ENST00000590301 TSPAN7P41732 249 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TNNT3P45378 269 aaPredicted RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 CLCNKAP51800 687 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 LIMK2P53671 638 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 EPHA4P54764 986 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 OR1D5P58170 312 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 RAB15P59190 212 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CFHR1Q03591 330 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CDK18Q07002 472 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 AP1B1Q10567 949 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 ZBTB17Q13105 803 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TBX2Q13207 712 aaPredicted RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 PTPRRQ15256 657 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TAZQ16635 292 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 AMZ1Q400G9 498 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TEX44Q53QW1 395 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 ZDHHC20Q5W0Z9 365 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 WDR74Q6RFH5 385 aaPredicted RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 RFLNAQ6ZTI6 216 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 MARK2Q7KZI7 788 aaKnown RBP7.53□□□□□ -1.2
NPC1-208ENST00000590301 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SLC9B2Q86UD5 537 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 TRIM74Q86UV6 250 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 RFX6Q8HWS3 928 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 PHYKPLQ8IUZ5 450 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SFTPA2Q8IWL1 248 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPC1-208ENST00000590301 TRAM1L1Q8N609 369 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 ZSCAN1Q8NBB4 408 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 OR10G6Q8NH81 332 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 SLC37A2Q8TED4 501 aa7.53□□□□□ -1.2
NPC1-208ENST00000590301 AGAP2Q99490 1192 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms