RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PTAR1Q7Z6K3 402 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ZNF683Q8IZ20 524 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 TMIEQ8NEW7 156 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 HSPH1Q92598 858 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ARHGEF2Q92974 986 aaKnown RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 DACT3Q96B18 629 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ARRDC3Q96B67 414 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 CELF6Q96J87 481 aaKnown RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 FEM1CQ96JP0 617 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 PWWP2AQ96N64 755 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ELF4Q99607 663 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 YIPF4Q9BSR8 244 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 MAGEH1Q9H213 219 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 HSD3B7Q9H2F3 369 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 ZWILCHQ9H900 591 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 PREBQ9HCU5 417 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 MRPL47Q9HD33 250 aaKnown RBP8.33□□□□□ -1.08
DNMT1-219ENST00000589349 DONSONQ9NYP3 566 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 FZD10Q9ULW2 581 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 BTBD3Q9Y2F9 522 aa8.33□□□□□ -1.08
DNMT1-219ENST00000589349 CKAP5Q14008 2032 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 DNAH14Q0VDD8 3507 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 NCOR2Q9Y618 2525 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 ASCC3Q8N3C0 2202 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 ZSCAN5CA6NGD5 496 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 RASA4BC9J798 803 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 FFAR2O15552 330 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 RASA4O43374 803 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 KDELR3O43731 214 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 TMCC1O94876 653 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 POP4O95707 220 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 PAK4O96013 591 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 WNT1P04628 370 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 TPM1P09493 284 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 ATXN1LP0C7T5 689 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 THEGLP0DJG4 465 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 GJC1P36383 396 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 NUDT1P36639 197 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 MC3RP41968 323 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 CLDN2P57739 230 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 RPS21P63220 83 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 SHC2P98077 582 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 PTP4A2Q12974 167 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 MAMLD1Q13495 774 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 KLHL40Q2TBA0 621 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 MYLK3Q32MK0 819 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 ZNF542PQ5EBM4 170 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 LRRC73Q5JTD7 316 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 SEL1L3Q68CR1 1132 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 APTXQ7Z2E3 356 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 ZNF571Q7Z3V5 609 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 MTDHQ86UE4 582 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 HORMAD1Q86X24 394 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 RTL3Q8N8U3 475 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 CXorf40AQ8TE69 158 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 KISS1RQ969F8 398 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 NTAN1Q96AB6 310 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 HMCESQ96FZ2 354 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 CNDP2Q96KP4 475 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 GDAP1L1Q96MZ0 367 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 KLHL32Q96NJ5 620 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 JAM3Q9BX67 310 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 SLC6A20Q9NP91 592 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 TMEM248Q9NWD8 314 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 IFNKQ9P0W0 207 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 DMTF1Q9Y222 760 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 LUC7L2Q9Y383 392 aaKnown RBP8.32□□□□□ -1.08
DNMT1-219ENST00000589349 TRAF6Q9Y4K3 522 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 PCDHGB2Q9Y5G2 931 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 SCINQ9Y6U3 715 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
DNMT1-219ENST00000589349 A0A1B0GTQ1 180 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 FAM149AA5PLN7 773 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 IGLON5A6NGN9 336 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ARHGAP42A6NI28 874 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 C16orf96A6NNT2 1141 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 YKT6O15498 198 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 TNFSF14O43557 240 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 GJB3O75712 270 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 PALMO75781 387 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ZMPSTE24O75844 475 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ZNF883P0CG24 379 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 MYBL1P10243 752 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ADRB3P13945 408 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 JUPP14923 745 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 HNRNPA2B1P22626 353 aaKnown RBP8.31□□□□□ -1.08
DNMT1-219ENST00000589349 NXPH1P58417 271 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 KRT81Q14533 505 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 IQCB1Q15051 598 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 SMTNL2Q2TAL5 461 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ZNF805Q5CZA5 627 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 ERMARDQ5T6L9 678 aa8.31□□□□□ -1.08
DNMT1-219ENST00000589349 PIP5KL1Q5T9C9 394 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms