RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	LSAMP	Q13449	338 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TAF1A	Q15573	450 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	C11orf91	Q3C1V1	193 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GPR158	Q5T848	1215 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	FOXB2	Q5VYV0	432 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	KANK2	Q63ZY3	851 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	OGFOD2	Q6N063	350 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	B3GNT6	Q6ZMB0	384 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	FKBP9P1	Q75LS8	142 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CAMK1D	Q8IU85	385 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	COLGALT2	Q8IYK4	626 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GJD3	Q8N144	294 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	SPATA6L	Q8N4H0	392 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	OVCA2	Q8WZ82	227 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	C1QTNF3	Q9BXJ4	246 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	SEZ6L	Q9BYH1	1024 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TRIM54	Q9BYV2	358 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ELAC1	Q9H777	363 aa	Known RBP	13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	FIS1	Q9Y3D6	152 aa		13.99	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ANKRD36	A6QL64	1941 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	NEMP2	A6NFY4	417 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	HOXA2	O43364	376 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	VPS26A	O75436	327 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	RHOBTB1	O94844	696 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GPI	P06744	558 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	F7	P08709	466 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	HAPLN1	P10915	354 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ZNF37A	P17032	561 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TACR2	P21452	398 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GPX3	P22352	226 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TTPA	P49638	278 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CDKN2D	P55273	166 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CDH4	P55283	916 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TUBA4A	P68366	448 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MGAT5B	Q3V5L5	792 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	VARS2	Q5ST30	1063 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	RAP1GAP2	Q684P5	730 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	STK40	Q8N2I9	435 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	FBXO39	Q8N4B4	442 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PCDH20	Q8N6Y1	951 aa	Known RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TNIP2	Q8NFZ5	429 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	SHKBP1	Q8TBC3	707 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	HM13	Q8TCT9	377 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	BLOC1S5	Q8TDH9	187 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	SLC45A3	Q96JT2	553 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MARK4	Q96L34	752 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TBATA	Q96M53	351 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	C9orf16	Q9BUW7	83 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CINP	Q9BW66	212 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ADGRE3	Q9BY15	652 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MID1IP1	Q9NPA3	183 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PNPLA3	Q9NST1	481 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TUBA8	Q9NY65	449 aa	Predicted RBP	13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516	RNF112	Q9ULX5	631 aa		13.98	□□□□□ -0.17
NEDD4L-223	ENST00000588516		A0A0J9YYE9	177 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CCDC162P	A2VCL2	907 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	FBP2	O00757	339 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CLDN11	O75508	207 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PSMA4	P25789	261 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	KCNK10	P57789	538 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MAX	P61244	160 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GPR17	Q13304	367 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MRPL58	Q14197	206 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	DDR2	Q16832	855 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TRIM71	Q2Q1W2	868 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	UGT3A2	Q3SY77	523 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ALF	Q53S48	1182 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ZNF789	Q5FWF6	425 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	INTS11	Q5TA45	600 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	IL23R	Q5VWK5	629 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	KRT80	Q6KB66	452 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PPP4R4	Q6NUP7	873 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PAOX	Q6QHF9	649 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	GALNT13	Q8IUC8	556 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	HERC6	Q8IVU3	1022 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ABI1	Q8IZP0	508 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PHC3	Q8NDX5	983 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TWIST2	Q8WVJ9	160 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ANKRD49	Q8WVL7	239 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PPWD1	Q96BP3	646 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CNBD2	Q96M20	576 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	KLHL5	Q96PQ7	755 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MGME1	Q9BQP7	344 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	KCNH6	Q9H252	994 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	AKTIP	Q9H8T0	292 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	TMEM161A	Q9NX61	479 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	ABCD2	Q9UBJ2	740 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	UBA2	Q9UBT2	640 aa	Predicted RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	SUN2	Q9UH99	717 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	DNMT3L	Q9UJW3	386 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	PTBP2	Q9UKA9	531 aa	Known RBP	13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	MYRF	Q9Y2G1	1151 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	AP3M1	Q9Y2T2	418 aa		13.97	□□□□□ -0.17
NEDD4L-223	ENST00000588516	REV3L	O60673	3130 aa		13.96	□□□□□ -0.17
NEDD4L-223	ENST00000588516	AURKA	O14965	403 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms