RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 OXNAD1Q96HP4 312 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC6A-203ENST00000587818 QKIQ96PU8 341 aaKnown RBP eCLIP19.89■□□□□ 0.776e-6■■■■□ 23.1
TRAPPC6A-203ENST00000587818 SPATA16Q9BXB7 569 aa19.89■□□□□ 0.77
TRAPPC6A-203ENST00000587818 BPIFA1Q9NP55 256 aa19.89■□□□□ 0.77
TRAPPC6A-203ENST00000587818 FAM153AQ9UHL3 310 aa19.89■□□□□ 0.77
TRAPPC6A-203ENST00000587818 A0A087WV48 116 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 BTNL10A8MVZ5 291 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PYGLP06737 847 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PYGMP11217 842 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CTNNA2P26232 953 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CHRNA4P43681 627 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 OR1D5P58170 312 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CHST15Q7LFX5 561 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 GALNT13Q8IUC8 556 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 NAGSQ8N159 534 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 WDR48Q8TAF3 677 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ACTL9Q8TC94 416 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ALG3Q92685 438 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PRR11Q96HE9 360 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 OSBPL8Q9BZF1 889 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 EPB41L5Q9HCM4 733 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 APPL1Q9UKG1 709 aa19.88■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ZFC3H1O60293 1989 aaKnown RBP19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 LOC285095A0A1B0GVY8 99 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 MACROD2A1Z1Q3 448 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RGSL1A5PLK6 1076 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 DNAJC6O75061 913 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 EML2O95834 649 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ALDH4A1P30038 563 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RWDD2BP57060 319 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 COPS2P61201 443 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 B4GALNT1Q00973 533 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 OTUD4Q01804 1114 aaKnown RBP19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 AMZ1Q400G9 498 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SIRPB2Q5JXA9 342 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 LRRC69Q6ZNQ3 347 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 USP53Q70EK8 1073 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 TMPRSS9Q7Z410 1059 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SPRED1Q7Z699 444 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 C17orf82Q86X59 251 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RAVER1Q8IY67 606 aaKnown RBP19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 LRRC57Q8N9N7 239 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 MRGPRX2Q96LB1 330 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 FCRL5Q96RD9 977 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PACSIN2Q9UNF0 486 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 LAMA5O15230 3695 aa19.87■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RHPN2P1A8MT19 583 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 HACD1B0YJ81 288 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 APOC4-APOC2K7ER74 178 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PPM1DO15297 605 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 MTSS1O43312 755 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 APOC2P02655 101 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 BPIP17213 487 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RBMS1P29558 406 aaKnown RBP19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SLC14A2Q15849 920 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PDZD3Q86UT5 571 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 LSMEM2Q8N112 164 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 IPMKQ8NFU5 416 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 WDR36Q8NI36 951 aaKnown RBP19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SNIP1Q8TAD8 396 aaKnown RBP19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ZNF578Q96N58 590 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CDH19Q9H159 772 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 OR2AG1Q9H205 316 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ASCL3Q9NQ33 180 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 IMPACTQ9P2X3 320 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ATXN10Q9UBB4 475 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RSPH14Q9UHP6 348 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CELSR3Q9NYQ7 3312 aa19.86■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ZFYVE26Q68DK2 2539 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CCDC187A0A096LP49 1063 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CCDC66A2RUB6 948 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 D6RAR5 112 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RRP8O43159 456 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 BUD23O43709 281 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 NUDT21O43809 227 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 TNFSF15O95150 251 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SLC25A14O95258 325 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 AGTP01019 485 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 HGFP14210 728 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 PNLIPP16233 465 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ZNF8P17098 575 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 INHBCP55103 352 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 EIF3EP60228 445 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 XRCC4Q13426 336 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 BIRC2Q13490 618 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 DARS2Q6PI48 645 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 GRAMD1AQ96CP6 724 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CALR3Q96L12 384 aaKnown RBP19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SLC46A1Q96NT5 459 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 VAT1Q99536 393 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 RDH14Q9HBH5 336 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 TRHDEQ9UKU6 1024 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 KCNK6Q9Y257 313 aa19.85■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ZFHX4Q86UP3 3567 aa19.84■□□□□ 0.77
TRAPPC6A-203ENST00000587818 SNX2O60749 519 aa19.84■□□□□ 0.77
TRAPPC6A-203ENST00000587818 MTX2O75431 263 aa19.84■□□□□ 0.77
TRAPPC6A-203ENST00000587818 FTCDO95954 541 aa19.84■□□□□ 0.77
TRAPPC6A-203ENST00000587818 ACP5P13686 325 aa19.84■□□□□ 0.77
TRAPPC6A-203ENST00000587818 CDC25BP30305 580 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms