RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 TMC3Q7Z5M5 1100 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 SPRED1Q7Z699 444 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 ZNF567Q8N184 647 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 ARL14Q8N4G2 192 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 SPC24Q8NBT2 197 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 WDR36Q8NI36 951 aaKnown RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 SRPK1Q96SB4 655 aaKnown RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 EPB41L5Q9HCM4 733 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 THSD1Q9NS62 852 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 RAD18Q9NS91 495 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 VPS18Q9P253 973 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 ATXN7L1Q9ULK2 861 aaPredicted RBP17.56■□□□□ 0.4
TPM4-206ENST00000587201 CHD6Q8TD26 2715 aa17.56■□□□□ 0.4
TPM4-206ENST00000587201 A0A1W2PNU3 283 aaPredicted RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 MACROD2A1Z1Q3 448 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 TMX2-CTNND1H3BSU7 103 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 DNAJC6O75061 913 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 CTNNA2P26232 953 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 CETN2P41208 172 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 WNT3AP56704 352 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 RWDD2BP57060 319 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 PCBP4P57723 403 aaKnown RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 ERVPABLB-1P60509 514 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 XRCC4Q13426 336 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 LRP8Q14114 963 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 ZNF569Q5MCW4 686 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 CHST15Q7LFX5 561 aaPredicted RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 B3GNT8Q7Z7M8 397 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 PDZD3Q86UT5 571 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 C17orf82Q86X59 251 aaPredicted RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 NAGSQ8N159 534 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 GPR26Q8NDV2 337 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 ZNF248Q8NDW4 579 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 PATE1Q8WXA2 126 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 LIN37Q96GY3 246 aaPredicted RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 NAF1Q96HR8 494 aaKnown RBP17.55■□□□□ 0.4
TPM4-206ENST00000587201 TMEM74Q96NL1 305 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 FCRL5Q96RD9 977 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 OSBPL8Q9BZF1 889 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 FOXP3Q9BZS1 431 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 STRADBQ9C0K7 418 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 IMPACTQ9P2X3 320 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 PRKAB1Q9Y478 270 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 PCDHGA8Q9Y5G5 932 aa17.55■□□□□ 0.4
TPM4-206ENST00000587201 ZW10O43264 779 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 RBL1P28749 1068 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 ALDH4A1P30038 563 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 CDC25BP30305 580 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 DCDC1P59894 354 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 B4GALNT1Q00973 533 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 NOMO1Q15155 1222 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 IGF2-ASQ6U949 168 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 KDELC1Q6UW63 502 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 TMEM139Q8IV31 216 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 TXLNBQ8N3L3 684 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 SLC25A41Q8N5S1 370 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 TRAM1L1Q8N609 369 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 CRELD1Q96HD1 420 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 PRR11Q96HE9 360 aaPredicted RBP17.54■□□□□ 0.4
TPM4-206ENST00000587201 MRGPRX2Q96LB1 330 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 SLC46A1Q96NT5 459 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 FERMT1Q9BQL6 677 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 HERPUD2Q9BSE4 406 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 ZSCAN5AQ9BUG6 496 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 C10orf88Q9H8K7 445 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 RMI1Q9H9A7 625 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 ASCL3Q9NQ33 180 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 TRHDEQ9UKU6 1024 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 SPO11Q9Y5K1 396 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 PCYT1BQ9Y5K3 369 aaPredicted RBP17.54■□□□□ 0.4
TPM4-206ENST00000587201 FAM208BQ5VWN6 2430 aa17.54■□□□□ 0.4
TPM4-206ENST00000587201 ARHGEF17Q96PE2 2063 aaPredicted RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 LOC285095A0A1B0GVY8 99 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 PMS2P1A4D2B8 440 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 GRID2IPA4D2P6 1211 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 AURKAO14965 403 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 SLC25A14O95258 325 aaPredicted RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 BPIP17213 487 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 PTPN7P35236 360 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 OR1D5P58170 312 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 OTUD4Q01804 1114 aaKnown RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 KIF5AQ12840 1032 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 MPP3Q13368 585 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 AMZ1Q400G9 498 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 MAP9Q49MG5 647 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 FBXO39Q8N4B4 442 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 LRRC57Q8N9N7 239 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 IPMKQ8NFU5 416 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 ACTL9Q8TC94 416 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 OXNAD1Q96HP4 312 aaPredicted RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 CARD9Q9H257 536 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 BPIFA1Q9NP55 256 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 ARFGAP3Q9NP61 516 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 NFKBIL1Q9UBC1 381 aaPredicted RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 AMFRQ9UKV5 643 aa17.53■□□□□ 0.4
TPM4-206ENST00000587201 DSPP15924 2871 aaKnown RBP17.53■□□□□ 0.4
TPM4-206ENST00000587201 TRBV23OR9-2A0A075B6M9 112 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms