RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 C16orf46Q6P387 395 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
NPC1-205ENST00000587163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
NPC1-205ENST00000587163 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 ZPBPQ9BS86 351 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 EFHD1Q9BUP0 239 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 TBC1D10AQ9BXI6 508 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 HAUS4Q9H6D7 363 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.18■□□□□ 0.18
NPC1-205ENST00000587163 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
NPC1-205ENST00000587163 SPENQ96T58 3664 aaKnown RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 PRR19A6NJB7 356 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 LRRC53A6NM62 1247 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.18
NPC1-205ENST00000587163 POLR1CO15160 346 aaPredicted RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 SNX2O60749 519 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 CLDN7O95471 211 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 PRLP01236 227 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 NTRK1P04629 796 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 RARAP10276 462 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 ZNF30P17039 623 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 TCN2P20062 427 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 NR1D1P20393 614 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 STAT5AP42229 794 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 MYL5Q02045 173 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 ITKQ08881 620 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 LACTB2Q53H82 288 aaPredicted RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 BOLA3Q53S33 107 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 ZNF653Q96CK0 615 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 PSMG3-AS1Q96PY0 264 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 TRIT1Q9H3H1 467 aaKnown RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 LMBRD1Q9NUN5 540 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 SIDT1Q9NXL6 827 aaKnown RBP16.17■□□□□ 0.18
NPC1-205ENST00000587163 VPS18Q9P253 973 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 CHKBQ9Y259 395 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 KCNMB2Q9Y691 235 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 TEX15Q9BXT5 2789 aa16.17■□□□□ 0.18
NPC1-205ENST00000587163 FADS2P1A8MWK0 482 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 MTSS1O43312 755 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 PYGLP06737 847 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 FURINP09958 794 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 GZMAP12544 262 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 ACP5P13686 325 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 ZNF28P17035 718 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 IL4RP24394 825 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 MAN1A1P33908 653 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 DSC2Q02487 901 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
NPC1-205ENST00000587163 LYSMD3Q7Z3D4 306 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 SLC9B2Q86UD5 537 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 NDUFAF2Q8N183 169 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 FAM26EQ8N5C1 309 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 MIB2Q96AX9 1013 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 SH3KBP1Q96B97 665 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 PCDH18Q9HCL0 1135 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 TP53TG5Q9Y2B4 290 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 RPS6KL1Q9Y6S9 549 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 SCINQ9Y6U3 715 aa16.16■□□□□ 0.18
NPC1-205ENST00000587163 USP9XQ93008 2570 aaPredicted RBP16.16■□□□□ 0.18
NPC1-205ENST00000587163 F3P13726 295 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 EPHB1P54762 984 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 EPHA4P54764 986 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 GFERP55789 205 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 MC1RQ01726 317 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 MMRN1Q13201 1228 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 POLR1EQ9GZS1 481 aaKnown RBP16.15■□□□□ 0.18
NPC1-205ENST00000587163 PRDM8Q9NQV8 689 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 OGFRQ9NZT2 677 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 CPNE7Q9UBL6 633 aa16.15■□□□□ 0.18
NPC1-205ENST00000587163 BLACEA4D250 179 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 SERPINB6P35237 376 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 DLSTP36957 453 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 CD97P48960 835 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 SPINT3P49223 89 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 MLLT10P55197 1068 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 FOXM1Q08050 763 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 NIPAL4Q0D2K0 466 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 KLRB1Q12918 225 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 SEPT6Q14141 434 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 MAP7Q14244 749 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 ASIC2Q16515 512 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 HENMT1Q5T8I9 393 aaKnown RBP16.14■□□□□ 0.17
NPC1-205ENST00000587163 ALG1LQ6GMV1 187 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 ESX1Q8N693 406 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 ARRDC2Q8TBH0 407 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 LRRN4Q8WUT4 740 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 TEKT4Q8WW24 435 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 BTBD6Q96KE9 485 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 HERPUD2Q9BSE4 406 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 TDRD1Q9BXT4 1180 aaKnown RBP16.14■□□□□ 0.17
NPC1-205ENST00000587163 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.14■□□□□ 0.17
NPC1-205ENST00000587163 ULBP3Q9BZM4 244 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 STN1Q9H668 368 aaKnown RBP16.14■□□□□ 0.17
NPC1-205ENST00000587163 MRPL47Q9HD33 250 aaKnown RBP16.14■□□□□ 0.17
NPC1-205ENST00000587163 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
NPC1-205ENST00000587163 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms