RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 KIR2DS3K7RE56 304 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 INPP4BO15327 924 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SOD1P00441 154 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 PRLP01236 227 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 VCLP18206 1134 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 ATP1A2P50993 1020 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 EPHA4P54764 986 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 HADHBP55084 474 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 RAB15P59190 212 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 CDK18Q07002 472 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 NIPAL4Q0D2K0 466 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SLC10A2Q12908 348 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SQSTM1Q13501 440 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 KIR2DS5Q14953 304 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 QPCTQ16769 361 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 AMZ1Q400G9 498 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 TEX44Q53QW1 395 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 KCTD16Q68DU8 428 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SARM1Q6SZW1 724 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 MARK2Q7KZI7 788 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 NAGSQ8N159 534 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 AGBL5Q8NDL9 886 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 TFB1MQ8WVM0 346 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 P3H4Q92791 437 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 LRRC45Q96CN5 670 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 IMP4Q96G21 291 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 OLFM3Q96PB7 478 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 TEFMQ96QE5 360 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SPATA16Q9BXB7 569 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 ASPSCR1Q9BZE9 553 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 GPR63Q9BZJ6 419 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 TRIM5Q9C035 493 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 ZCCHC2Q9C0B9 1178 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 TRABDQ9H4I3 376 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SARS2Q9NP81 518 aaKnown RBP11.16□□□□□ -0.62
ACTN4-209ENST00000586538 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
ACTN4-209ENST00000586538 A0A1W2PNU3 283 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-209ENST00000586538 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 STMND1H3BQB6 276 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 SLC25A14O95258 325 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CETN2P41208 172 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 POLD2P49005 469 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CLCNKAP51800 687 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 LIMK2P53671 638 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 MAPK10P53779 464 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 OR1D5P58170 312 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 HHEXQ03014 270 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 ZBTB17Q13105 803 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CLN3Q13286 438 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TFDP3Q5H9I0 405 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 MANEAQ5SRI9 462 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TMEM71Q6P5X7 295 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CHST15Q7LFX5 561 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-209ENST00000586538 LYSMD3Q7Z3D4 306 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 SFRP1Q8N474 314 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TRAM1L1Q8N609 369 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 RNF214Q8ND24 703 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-209ENST00000586538 AGAP3Q96P47 875 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 PPP1R2P1Q96PQ5 205 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 PLEKHG4BQ96PX9 1271 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TAAR9Q96RI9 348 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CHP1Q99653 195 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 CPNE5Q9HCH3 593 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 HACD3Q9P035 362 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 TMEM98Q9Y2Y6 226 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 ZNF711Q9Y462 761 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 LOC400499M0QZD8 3231 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 BPTFQ12830 3046 aa11.15□□□□□ -0.62
ACTN4-209ENST00000586538 ARHGEF17Q96PE2 2063 aaPredicted RBP11.15□□□□□ -0.63
ACTN4-209ENST00000586538 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.63
ACTN4-209ENST00000586538 IGSF10Q6WRI0 2623 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 IGHV1OR21-1A0A087WYE8 117 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 C3orf70A6NLC5 250 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-209ENST00000586538 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-209ENST00000586538 GRID2O43424 1007 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 VEGFDO43915 354 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 NUAK1O60285 661 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 DNAJC6O75061 913 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 PPFIA2O75334 1257 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 ZRANB2O95218 330 aaKnown RBP eCLIP11.14□□□□□ -0.63
ACTN4-209ENST00000586538 NDST3O95803 873 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 EPOP01588 193 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 FUCA1P04066 466 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 MMP2P08253 660 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 THRAP10827 490 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 F3P13726 295 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 TNNT1P13805 278 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 COMTP21964 271 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 CDKN2BP42772 138 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 MAGEA1P43355 309 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 COPS2P61201 443 aa11.14□□□□□ -0.63
ACTN4-209ENST00000586538 DYNLT1P63172 113 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms